PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON58528.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

LBD

Protein Properties

Length: 227aa MW: 24822.3 Da PI: 5.8987

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON58528.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	136.1	1.3e-42	76	175	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+C+++Cvlapyfp ++p kf ++h++FGasn++k+l+++pe++r da+ss+vyeA+ar+rdPvyG++g i +lq+q+++l+a+la++++ PON58528.1 76 PCAACKILRRRCVDKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQEIPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVNELQAQLAKAQA 174 7***********************************************************************************************998 PP DUF260 100 e 100 e PON58528.1 175 E 175 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
MEFKAKIPLT PPRLTVPTPF SSSQYSPNNS STSSPTPNSY QLSSPPPSQS SPTSTTTVDP 60 SPPPPPPTPP AIVMSPCAAC KILRRRCVDK CVLAPYFPPT EPLKFTIAHR VFGASNIIKF 120 LQEIPESQRA DAVSSMVYEA NARIRDPVYG CAGAICQLQK QVNELQAQLA KAQAELVNMQ 180 CQQANLIALI CMDVTQLQEP NSQQQPYVDT SCFLDDNTLG TWEPLWT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07900.1	3e-65	LBD family protein