PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON58554.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 1750aa MW: 191569 Da PI: 6.1007

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON58554.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25	4.4e-08	802	843	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT+eE e++ +G++ +k+Ia+ + ++t +c+++++k PON58554.1 802 PWTPEEKEIFMVKLGTFGKD-FKKIASFLD-HKTTADCVEFYYK 843 8***************99.*****.*********98 PP
2	Myb_DNA-binding	30.8	7e-10	1019	1059	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT eE ++++av +G + +++I++++ R++ qck ++ PON58554.1 1019 DWTDEEKSIFIQAVSSYGRD-FAKISECVR-SRSRDQCKVFFS 1059 5***************77.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1750 aa Download sequence
MPPEPLPWDR KDFFRERKHE RSESLGSVAR WRDSSHHGGS RELSRWGSAD FRRPLGHGKQ 60 GGWHFFPEES GHGYVSSRAS EKVLEDESCR SSISRGEGKY GRSSRENRGS YNQREWRGHS 120 WEANNGFSNT PGRAHDLNNE QKSRDDLPSY SSHSNGGFGN TWEQIQFKDQ HDKAGGSNGL 180 GTGQKCDREN SLGLNDWKPM KWTRSGSMSS RGSGFSHLSS SKSVGAVDSS EAKVETQTKN 240 ATPVQSPSAD ANACVTSAGS EETTSRKKPR LGWGEGLAKY EKKKVDGPEV TLNKDGAIFA 300 GSNTEPSNSL SSSLLDKSPR VMSFSDCASP ATPSSVACSS SPGLEEKSFG KAVNIDNDSS 360 NLCGSPGPVP QNHTEGFSFN LEKLDFNSIA TLGSSLVELL LLDDPNSVDS SFVRSTAINK 420 LLVWKDEISK TLEVTETEID SLENELKSLN SIPGGSSPSA SSSLPKEDHL KSCEEQGVVT 480 HQIPRPAPLQ IVSFGDAVVE KIPICNGDRE EICANVKEDD VDSPGTVTSK FVEPLSLAKS 540 VSSYDTLNDA AGDLNHSRLT NKEGQHSVSA SGGEETGPNT CVDFSMLTGV EVTPPDTDSL 600 GLFIGGEDKL NSAILSSNKE LAKGAHRVFN KILPQDECNL DISRVCNASS WQNHTVVKEK 660 FARRKQFLKF KERVLTLKLK AYQHLWKEDM RLLSIRKHRA KSQKKFELSF RPVHSGYQKH 720 RSSIRSRFSS PAGSLSLVPT TEVINFTSKL LLDSQVKKCR DALQMPALIL DKKEKIVSRF 780 ISNNGLVEDP CAVEKERAMI NPWTPEEKEI FMVKLGTFGK DFKKIASFLD HKTTADCVEF 840 YYKNHKSDSF EKKKKLDSGK QVKSLSNATY LMLGKKWNRE MNAASLDILG EASVIAANAD 900 VSIRSRQTCS GRLILGGLRE SKAPWGDDGT FERSSSFDIL GNDRETVAAD VLAGICGSLS 960 SEAMSSCITS SIDPGEGYKE WKSPKVDSVI RRPLTPDVTQ RLDDGTCSDE SCGEMDPTDW 1020 TDEEKSIFIQ AVSSYGRDFA KISECVRSRS RDQCKVFFSK ARKCLGLDVI HPGPGNERTF 1080 TGDDANGSGS GSENACAREM GSGICSDKSG SKMDEDLPLS AMKMNLDESD PAENLISQTA 1140 PSRAEEKDER EVLEHKRNVE ASESQASDAC PARGIPNLVS GDDSNVMKGV DEPKSLPIRE 1200 SNSVLVSIET GRQNGNEPGF SVAELASVCV GNDEPLNTES VVGIKPVDEI SSDGLRNQME 1260 GLEEKCNASM SQQSGLEFVV HDSNSTGNSS HLVPDRSSCS GFSLNPDYQH QVSLKLNSKD 1320 KSCVISLSQE TSLASANSMS LDSGAIQLEK NGNEDKMSTT LDFQESKDVC HISVCRDESH 1380 EHLTALPLLT NVQSSQVLRA YPLEMQIKKE VKGDIRCRNV SEVQSLPKSD RSSNNHLFSQ 1440 DCYLQRCNNL KSESSMPEFP LMSPKIEQVI DHSKSRSQSL SDSENSGRSG GDVKLFGKIL 1500 SNPSYLNNSN SGYRENEENE GSYEHKSSNK SSNLKVSNLH NSDGNSALLK FDRNNYMSIE 1560 NVQMRNYAYW DGTRLQATFP TVPDSAILLT KYPAAFSNFP TSTTKMEQQT LQAVVKSNEL 1620 NVNGASVFPT REISNSNGMV DYQVFRSREA AKVQPFTVDV KQRPDMFSEV QRRNGIEAIA 1680 SFQHQGRGMV GINVLGRGGI VVGGPCTTGV SDPVAALKMH FAKTEQQFGG QTSSIIGEDE 1740 SWRGNGDIGR

Sequence ? help Back to Top

Protein Sequence Length: 1750 aa Download sequence

MPPEPLPWDR KDFFRERKHE RSESLGSVAR WRDSSHHGGS RELSRWGSAD FRRPLGHGKQ  60
GGWHFFPEES GHGYVSSRAS EKVLEDESCR SSISRGEGKY GRSSRENRGS YNQREWRGHS  120
WEANNGFSNT PGRAHDLNNE QKSRDDLPSY SSHSNGGFGN TWEQIQFKDQ HDKAGGSNGL  180
GTGQKCDREN SLGLNDWKPM KWTRSGSMSS RGSGFSHLSS SKSVGAVDSS EAKVETQTKN  240
ATPVQSPSAD ANACVTSAGS EETTSRKKPR LGWGEGLAKY EKKKVDGPEV TLNKDGAIFA  300
GSNTEPSNSL SSSLLDKSPR VMSFSDCASP ATPSSVACSS SPGLEEKSFG KAVNIDNDSS  360
NLCGSPGPVP QNHTEGFSFN LEKLDFNSIA TLGSSLVELL LLDDPNSVDS SFVRSTAINK  420
LLVWKDEISK TLEVTETEID SLENELKSLN SIPGGSSPSA SSSLPKEDHL KSCEEQGVVT  480
HQIPRPAPLQ IVSFGDAVVE KIPICNGDRE EICANVKEDD VDSPGTVTSK FVEPLSLAKS  540
VSSYDTLNDA AGDLNHSRLT NKEGQHSVSA SGGEETGPNT CVDFSMLTGV EVTPPDTDSL  600
GLFIGGEDKL NSAILSSNKE LAKGAHRVFN KILPQDECNL DISRVCNASS WQNHTVVKEK  660
FARRKQFLKF KERVLTLKLK AYQHLWKEDM RLLSIRKHRA KSQKKFELSF RPVHSGYQKH  720
RSSIRSRFSS PAGSLSLVPT TEVINFTSKL LLDSQVKKCR DALQMPALIL DKKEKIVSRF  780
ISNNGLVEDP CAVEKERAMI NPWTPEEKEI FMVKLGTFGK DFKKIASFLD HKTTADCVEF  840
YYKNHKSDSF EKKKKLDSGK QVKSLSNATY LMLGKKWNRE MNAASLDILG EASVIAANAD  900
VSIRSRQTCS GRLILGGLRE SKAPWGDDGT FERSSSFDIL GNDRETVAAD VLAGICGSLS  960
SEAMSSCITS SIDPGEGYKE WKSPKVDSVI RRPLTPDVTQ RLDDGTCSDE SCGEMDPTDW  1020
TDEEKSIFIQ AVSSYGRDFA KISECVRSRS RDQCKVFFSK ARKCLGLDVI HPGPGNERTF  1080
TGDDANGSGS GSENACAREM GSGICSDKSG SKMDEDLPLS AMKMNLDESD PAENLISQTA  1140
PSRAEEKDER EVLEHKRNVE ASESQASDAC PARGIPNLVS GDDSNVMKGV DEPKSLPIRE  1200
SNSVLVSIET GRQNGNEPGF SVAELASVCV GNDEPLNTES VVGIKPVDEI SSDGLRNQME  1260
GLEEKCNASM SQQSGLEFVV HDSNSTGNSS HLVPDRSSCS GFSLNPDYQH QVSLKLNSKD  1320
KSCVISLSQE TSLASANSMS LDSGAIQLEK NGNEDKMSTT LDFQESKDVC HISVCRDESH  1380
EHLTALPLLT NVQSSQVLRA YPLEMQIKKE VKGDIRCRNV SEVQSLPKSD RSSNNHLFSQ  1440
DCYLQRCNNL KSESSMPEFP LMSPKIEQVI DHSKSRSQSL SDSENSGRSG GDVKLFGKIL  1500
SNPSYLNNSN SGYRENEENE GSYEHKSSNK SSNLKVSNLH NSDGNSALLK FDRNNYMSIE  1560
NVQMRNYAYW DGTRLQATFP TVPDSAILLT KYPAAFSNFP TSTTKMEQQT LQAVVKSNEL  1620
NVNGASVFPT REISNSNGMV DYQVFRSREA AKVQPFTVDV KQRPDMFSEV QRRNGIEAIA  1680
SFQHQGRGMV GINVLGRGGI VVGGPCTTGV SDPVAALKMH FAKTEQQFGG QTSSIIGEDE  1740
SWRGNGDIGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-175	MYB family protein