PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON58795.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

LBD

Protein Properties

Length: 174aa MW: 19276.9 Da PI: 7.4677

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON58795.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	146.1	9.7e-46	13	112	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+Ca+dCv+apyfpa++p+kfa vhk+FGasnv k+l++lpe++r+da+ss+vyeA+ar+rdPvyG+vg i++lqqq++ l+++lal+++ PON58795.1 13 PCAACKLLRRRCAQDCVFAPYFPADEPQKFASVHKVFGASNVNKMLQELPEDQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQA 111 7**********************************************************************************************9997 PP DUF260 100 e 100 e PON58795.1 112 E 112 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 174 aa Download sequence
MKESGRKQGA MSPCAACKLL RRRCAQDCVF APYFPADEPQ KFASVHKVFG ASNVNKMLQE 60 LPEDQRSDAV SSMVYEANAR VRDPVYGCVG AISSLQQQID VLQTQLALAQ AEVVHMRMVQ 120 LPSTSNPASN TINSTENKQH IMSINGSQTK SFFTMDMVVD HHHQPNMGES LWSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31320.1	1e-73	LBD family protein