PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON58827.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

WRKY

Protein Properties

Length: 243aa MW: 27135.7 Da PI: 7.4204

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON58827.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.2	1.4e-32	169	227	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk+s +prsYYrCt+++C+vkk+ver +ed ++v++tYeg+Hnh+ PON58827.1 169 LDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHS 227 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MEGERSGGSV VPISYELQVS FSAATPTPVP IHEMGFVQFE DHHHHHDDHH NVYSFLAPSS 60 HQSTGQLSSS AVAQPLTAGS TSTAAAASNS AMGFCHGDLV GRPSWNNNEQ MVGTLDPKAV 120 NDENCTGNAS DGSNSWWRSS SADKNKVKVR RKLREPRFCF QTRSDVDVLD DGYKWRKYGQ 180 KVVKNSLHPR SYYRCTHSNC RVKKRVERLS EDCRMVITTY EGRHNHSPSD DSNSSEHECF 240 SSF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	148	154	KVRRKLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44745.1	3e-57	WRKY family protein