PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON59064.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

NF-YA

Protein Properties

Length: 343aa MW: 37667 Da PI: 7.16

Description

NF-YA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON59064.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CBFB_NFYA	100.4	1.8e-31	175	231	1	58
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQyq+Il+RR +Rak+e+ek+l +k+rkpylheSRh+hA+rR+Rg+gGrF PON59064.1 175 QEPVYVNAKQYQGILRRRRARAKAEAEKRL-IKNRKPYLHESRHQHAMRRARGTGGRF 231 69**************************.************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MRSKSQNKDR LGLDSHSISP TNVYSEPWWR NVGYNPGSLP MTGGNASNSS SLEFPNGGSE 60 SNEDQSLSND GPNEEDDDGT KDSHVSASPQ SGNRGQEHQI MQHVSSTVPA VRDECLTHHP 120 QLELVGHSIQ ACASNPYQDP YYGGMMAAYG HQPMGYPPFY GMPQARMPLP LEMAQEPVYV 180 NAKQYQGILR RRRARAKAEA EKRLIKNRKP YLHESRHQHA MRRARGTGGR FAKKTDADTS 240 NCTEKERGSG SGQAHSSLSA CSSGSEPLAS DSNETWNSPN SQQEAYTALN YINGNGCYQN 300 HGGMQDANYQ LCPSERAEEG DCSGQQRGSL STNRASQRRL AIQ

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MRSKSQNKDR LGLDSHSISP TNVYSEPWWR NVGYNPGSLP MTGGNASNSS SLEFPNGGSE  60
SNEDQSLSND GPNEEDDDGT KDSHVSASPQ SGNRGQEHQI MQHVSSTVPA VRDECLTHHP  120
QLELVGHSIQ ACASNPYQDP YYGGMMAAYG HQPMGYPPFY GMPQARMPLP LEMAQEPVYV  180
NAKQYQGILR RRRARAKAEA EKRLIKNRKP YLHESRHQHA MRRARGTGGR FAKKTDADTS  240
NCTEKERGSG SGQAHSSLSA CSSGSEPLAS DSNETWNSPN SQQEAYTALN YINGNGCYQN  300
HGGMQDANYQ LCPSERAEEG DCSGQQRGSL STNRASQRRL AIQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12840.2	5e-70	NF-YA family protein