PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON59374.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 236aa    MW: 26868 Da    PI: 9.709
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON59374.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.65.4e-12112153351
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                  +GV++ k + +W A I++      +k+++lg+ g+ eeAa+++++a+ 
  PON59374.1 112 MRGVYY-K-NMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 153
                 79**96.5.7*********4.....5********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MVSLRRRKLL GLCSGRNSFL TPLPRFSGNG TTPANSTQNT RSISVHPVNL EEIKPLEENT  60
SVKGETESTV VSDSGLSDSP KEQHNQQVSG PPIKRRKRHR RKNFQNQEPC LMRGVYYKNM  120
KWQAAIKVDK KQIHLGTVGS QEEAARLYDR AAFMCGREPN FELSEEEKQE LRKFKWEEFL  180
AMTRHAITHK KHRRRVGPES QRNSEPSPLQ NDDSDSKNED NGPSGSEDVE PEVSVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.17e-49ERF family protein