PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON59431.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 351aa MW: 39473.2 Da PI: 7.8735

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON59431.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.4	1.2e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd +l+ v +lG g+W+ ++++ g++R++k+c++rw +yl PON59431.1 14 RGLWTAEEDAKLLAHVSKLGIGNWTMVPKKAGLNRCGKSCRLRWTNYL 61 788*******************************************97 PP
2	Myb_DNA-binding	46.7	7.6e-15	69	110	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +T++E++ ++++++ G++ W++Ia+ ++ gRt++++k++w++ PON59431.1 69 TFTPQEEDHIINLHHAIGSR-WSLIAKQLP-GRTDNDVKNYWNT 110 79****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MGRPPCCDKS NVKRGLWTAE EDAKLLAHVS KLGIGNWTMV PKKAGLNRCG KSCRLRWTNY 60 LRPDLKHDTF TPQEEDHIIN LHHAIGSRWS LIAKQLPGRT DNDVKNYWNT KLRKKLYNRG 120 IDPVTHKPIS QILSEFGNIS GLPNSGRHIM KSEPSSVIKE SIPSTNMIIS PRMEQVQALN 180 SLYNGPTQFQ VTNQQDIFNV QPRIFNEVTS SCSSSSSSHV TDLSSPQSSY SCQQSQPQIF 240 APSSSLNWRE FFLRDTLDSA EVITQQKQED GLQGLLLSAN PRKFANGSDQ ISSSIMRDED 300 KFVSFGSTNT HGGPMNNDQP KNASFVDAIL DRDSELRAEF PDFLDGSFEY Y

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MGRPPCCDKS NVKRGLWTAE EDAKLLAHVS KLGIGNWTMV PKKAGLNRCG KSCRLRWTNY  60
LRPDLKHDTF TPQEEDHIIN LHHAIGSRWS LIAKQLPGRT DNDVKNYWNT KLRKKLYNRG  120
IDPVTHKPIS QILSEFGNIS GLPNSGRHIM KSEPSSVIKE SIPSTNMIIS PRMEQVQALN  180
SLYNGPTQFQ VTNQQDIFNV QPRIFNEVTS SCSSSSSSHV TDLSSPQSSY SCQQSQPQIF  240
APSSSLNWRE FFLRDTLDSA EVITQQKQED GLQGLLLSAN PRKFANGSDQ ISSSIMRDED  300
KFVSFGSTNT HGGPMNNDQP KNASFVDAIL DRDSELRAEF PDFLDGSFEY Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28470.1	5e-83	MYB family protein