PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON59462.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

LBD

Protein Properties

Length: 276aa MW: 31401.2 Da PI: 6.8299

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON59462.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	130.5	6.9e-41	10	109	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 aCaaCk++rrkC+kdC+lap fpa+qp+kf+++h+lFG++n+ ++lk++++++++dam+s+++e+ +rar Pv+G++g+i++lq qleq+ +el l+++ PON59462.1 10 ACAACKYQRRKCSKDCTLAPFFPADQPEKFQYAHRLFGVRNINNILKQVSPQHKQDAMTSIIFESAMRARFPVHGCLGIIKQLQTQLEQHLEELRLVHK 108 7**********************************************************************************************9998 PP DUF260 100 e 100 + PON59462.1 109 S 109 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence
MTIKGGTSQA CAACKYQRRK CSKDCTLAPF FPADQPEKFQ YAHRLFGVRN INNILKQVSP 60 QHKQDAMTSI IFESAMRARF PVHGCLGIIK QLQTQLEQHL EELRLVHKSL AICKDQYQQQ 120 QIQCSSNDDV PIQQYIHHQF NSASLPMFSN YESLPVFSNH GSLTEGINNS IYISGDQGHH 180 EYFAKPITIQ NPSSNDVEPA LQQTLFASQL QYPSQQEVDV SYYGDIPFGT MADDRQSFIE 240 SKEHCESSAE SSLKKAIQMK NEHSSTERHQ KNEPKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47870.1	1e-37	LBD family protein