PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON59570.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family HSF
Protein Properties Length: 320aa    MW: 36542 Da    PI: 7.5228
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON59570.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind112.82.3e-35311232103
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y++++d+ +++++sw e++++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgFkk+  ++         weF++++F+kg k+ll++i+
    PON59570.1  31 FLTKTYQLVDDPLTDDIVSWGEDETTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFKKIVADR---------WEFANEYFRKGAKHLLSEIH 118
                   9****************************************************************999.........******************** PP

                   XXXXX CS
  HSF_DNA-bind  99 rkkse 103
                   r+k +
    PON59570.1 119 RRKAS 123
                   **986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MAFAVESNNI IRCEENMVFT VESQKAVPAP FLTKTYQLVD DPLTDDIVSW GEDETTFVVW  60
RPPEFARDLL PNYFKHNNFS SFVRQLNTYG FKKIVADRWE FANEYFRKGA KHLLSEIHRR  120
KASQQHQQQQ QFQNINNNNH HHHLLHRREH HQFSQLAFQQ VDCPESSFSW SNNFSASTTS  180
PLESDHHDHP NPKPCSDNIL TALTEDNQRL RRKNFMLLSE LTHMKSLYSD IIYFIQNHVK  240
PVVPSTVSTV SSSGTVPKIM ELGPSSPVGI VSEVKTSSLA FTKSCGALST EEKNGGVKLF  300
GVSLSGRKRL HPETTTDLSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.13e-76HSF family protein