PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON60133.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

C3H

Protein Properties

Length: 2215aa MW: 246128 Da PI: 7.642

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON60133.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	18.4	3.7e-06	2085	2106	6	27
-SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 6 CrffartGtCkyGdrCkFaHgp 27 C++f +tGtC+ G++Ck +H++ PON60133.1 2085 CSTFEATGTCPQGSKCKLHHPK 2106 *****************99985 PP

Sequence ? help Back to Top
Protein Sequence Length: 2215 aa Download sequence
MDLPNLLHHH HHQPRYVPLP NSSRPHHPDN PNFHNNPRFQ PQYHHHNHHV SQPQPQPTLP 60 PPPPKTPPFQ SLPPPPPPPP PHSSSSSSSS AHHPPPPIRP YNPGQSQFAF GGNPNLNRPP 120 FEDDHLRSSH PHRDFVLYGN VSHRVPLDDG RPRHRLPQFE PQIRPEIWDQ PRVLPEHQSE 180 RLQRPLDFEC GSQKFQFDHK SVSPYKVLRH DSEGSSRFIG EYVDGFESMH RDELLRGGDD 240 ENCSRRGSFL SSPGTSLRDT GFASNPSLSV RDLELETDSY NGQYSSAYDN EVFRSSREDG 300 VYDKQRWLHD KKFPRDAHKS SFERGSTEIS NGDDENYSRR GSFLSSPGTS FRDMGFVSNP 360 SLKVRDLESE TDSCSGRYGS TYDTEVFRGG RRDGLYDNQR RVRDRKFPRD AHNSSFERGN 420 TEITTGDGAH MGSVKREYYG PDLGRYSSRG SREDNNEYNR TPRKQLQKKS ALLRIQMAKP 480 NHRNAESEHL HYPGYLNNSN SSFFRRKDQY VYEEEREGSP IELDVSFKSN SLVAKAIMAP 540 SSSFDVTDAD LTLREMKIRE DSLSDKDCSN AELAKLSDST ANVDSSMYVG KNTSNHDDDT 600 IPSEENVVKN MCDTTSQASV SVTNQSVEKS EVKRSPTDAD LDKDCAKVAP DKVSLKVPKK 660 KKVVKKVIKR VVRRPHSHKL SSQQKKQHDR LLTADASIPT PSESSAIDKV VADLSGRCPN 720 EVDMLHEREK VEGSPMAIDS EEHGVDINSS LKCVDDIEKD GNSLINCSGS SSRQDEGPEN 780 AECSVQGLPT ILNSNKDLVK SLNVSTLPDI AHVVHIEQSC QNGDSLLLDS GLKKESLPVT 840 LPPVGKVDSD LLNSGKTKMH DSLMNTYRSD SCTLDIVNGT NLSKEESRVC DVGTFDALSK 900 LQCSIQVTSL QEKDFKEEVS KAHLSAESSA PDGSSSVRET TMDVDSSHHD RTTFLGYNNE 960 CNFEEDNGIS GRCTIDRITK PPSTDGATEF AGNFATISSP NNKISFGGNE GDTPLTGRKR 1020 TFRNQLDFLR TNDIDLDAVD VSNPTTAVDT TLSLSFEDPD LLLHGNGSSD GFPDANLIAR 1080 DDVNNGFLVT SSPCRKKRKV VASHLAIPSL TISETDEKAA DRSTSCAEAP VTSDDVLTEL 1140 KTDCDTFSAA SNLMHSESGI TVLYENKLSE ESSVTVGAVK SFFSDENMKS EHQLGCCPNN 1200 EKSNFPTVES LCPKGSGHEL KKVDAAVMAV NDQQVEAFNI GSGEEMLGLP SSREQVIAQD 1260 ETPQCMVPSA IQPLDIDRRF SLPDDHSGVS TTTSNDEAME LAPDTLTVMG SPQSSFNVSN 1320 VHISDAISVS QLSSETCRED GKLVEKSVDE AGFDAPAQKS FLQCTDSNVK SDCATESDQA 1380 IEGKTVSLPL QDSRSVSQGL NINSAECTGQ KNQLGHAIPR TFPSRSSYCF TTLKKKSTSI 1440 HANPRTWHRN SASSASPLPG SKPSSRTVPS QSQLPERDGN IHSTSYVRKG NSLVRKPSSA 1500 ASSLPQGSPG FSPSVYRLKS PVLDESKRSG EPDYRVDSEN SPGLLRMGET KSSCDKPRTP 1560 LIESDTKLPD CVAISSRDCT SFPSAGPLLN GCCETTSDPT SSLTNNDTTK FVEDSLTSEN 1620 QNGQPKSLEN QTELNDGKLA YLNTKRIVYV KRKSNQLVAT TNSTDLPAPN AHKMQASSFD 1680 GYYKRRKNQL IRTSLESHTR RPVMLDENLN PGVKMALKAI SSIRLSKRRS QKVVAKTFKR 1740 SANSLVWTLC SSQSSENNSG SVTHQKVYPH LFPWKRTAYW RSTMQNWNLI SKCSSLAISG 1800 KLLLTRKRDT VYTRSINGFS LRKSKVLSVG GSSLKWSKSI DRHSKKANEE ATLAVAAVER 1860 KKREQKGATR ISSGAKDRNH SSRERTFRIG LCRYKMDPSR RTLQRISDDE SSFSATNPDK 1920 DAKRSYIPRR LVIGHKEYIR IGNGNQLIRD PKKRSRLLAS EKVRWSLHTA RLRLARKRKY 1980 CQFFTRFGKC NKDNGRCPYI HDPSKIAVCT KFLNGLCSNA NCKLTHKVIP ERMPDCSYFL 2040 QGLCTNQSCP YRHVNVNPKA ITCEGFLKGY CADGNECQKK HSYVCSTFEA TGTCPQGSKC 2100 KLHHPKNRIQ EKKRKQSREV RNARGRYFGS PDLRVFESKK PLFEKNFAQD YNDIISDGSL 2160 SDFIAIDVSD DDFGEYNDAA SEQTTFCDSD TSDLQQEDLD ELIKPIRLMD ASMTS

Sequence ? help Back to Top

Protein Sequence Length: 2215 aa Download sequence

MDLPNLLHHH HHQPRYVPLP NSSRPHHPDN PNFHNNPRFQ PQYHHHNHHV SQPQPQPTLP  60
PPPPKTPPFQ SLPPPPPPPP PHSSSSSSSS AHHPPPPIRP YNPGQSQFAF GGNPNLNRPP  120
FEDDHLRSSH PHRDFVLYGN VSHRVPLDDG RPRHRLPQFE PQIRPEIWDQ PRVLPEHQSE  180
RLQRPLDFEC GSQKFQFDHK SVSPYKVLRH DSEGSSRFIG EYVDGFESMH RDELLRGGDD  240
ENCSRRGSFL SSPGTSLRDT GFASNPSLSV RDLELETDSY NGQYSSAYDN EVFRSSREDG  300
VYDKQRWLHD KKFPRDAHKS SFERGSTEIS NGDDENYSRR GSFLSSPGTS FRDMGFVSNP  360
SLKVRDLESE TDSCSGRYGS TYDTEVFRGG RRDGLYDNQR RVRDRKFPRD AHNSSFERGN  420
TEITTGDGAH MGSVKREYYG PDLGRYSSRG SREDNNEYNR TPRKQLQKKS ALLRIQMAKP  480
NHRNAESEHL HYPGYLNNSN SSFFRRKDQY VYEEEREGSP IELDVSFKSN SLVAKAIMAP  540
SSSFDVTDAD LTLREMKIRE DSLSDKDCSN AELAKLSDST ANVDSSMYVG KNTSNHDDDT  600
IPSEENVVKN MCDTTSQASV SVTNQSVEKS EVKRSPTDAD LDKDCAKVAP DKVSLKVPKK  660
KKVVKKVIKR VVRRPHSHKL SSQQKKQHDR LLTADASIPT PSESSAIDKV VADLSGRCPN  720
EVDMLHEREK VEGSPMAIDS EEHGVDINSS LKCVDDIEKD GNSLINCSGS SSRQDEGPEN  780
AECSVQGLPT ILNSNKDLVK SLNVSTLPDI AHVVHIEQSC QNGDSLLLDS GLKKESLPVT  840
LPPVGKVDSD LLNSGKTKMH DSLMNTYRSD SCTLDIVNGT NLSKEESRVC DVGTFDALSK  900
LQCSIQVTSL QEKDFKEEVS KAHLSAESSA PDGSSSVRET TMDVDSSHHD RTTFLGYNNE  960
CNFEEDNGIS GRCTIDRITK PPSTDGATEF AGNFATISSP NNKISFGGNE GDTPLTGRKR  1020
TFRNQLDFLR TNDIDLDAVD VSNPTTAVDT TLSLSFEDPD LLLHGNGSSD GFPDANLIAR  1080
DDVNNGFLVT SSPCRKKRKV VASHLAIPSL TISETDEKAA DRSTSCAEAP VTSDDVLTEL  1140
KTDCDTFSAA SNLMHSESGI TVLYENKLSE ESSVTVGAVK SFFSDENMKS EHQLGCCPNN  1200
EKSNFPTVES LCPKGSGHEL KKVDAAVMAV NDQQVEAFNI GSGEEMLGLP SSREQVIAQD  1260
ETPQCMVPSA IQPLDIDRRF SLPDDHSGVS TTTSNDEAME LAPDTLTVMG SPQSSFNVSN  1320
VHISDAISVS QLSSETCRED GKLVEKSVDE AGFDAPAQKS FLQCTDSNVK SDCATESDQA  1380
IEGKTVSLPL QDSRSVSQGL NINSAECTGQ KNQLGHAIPR TFPSRSSYCF TTLKKKSTSI  1440
HANPRTWHRN SASSASPLPG SKPSSRTVPS QSQLPERDGN IHSTSYVRKG NSLVRKPSSA  1500
ASSLPQGSPG FSPSVYRLKS PVLDESKRSG EPDYRVDSEN SPGLLRMGET KSSCDKPRTP  1560
LIESDTKLPD CVAISSRDCT SFPSAGPLLN GCCETTSDPT SSLTNNDTTK FVEDSLTSEN  1620
QNGQPKSLEN QTELNDGKLA YLNTKRIVYV KRKSNQLVAT TNSTDLPAPN AHKMQASSFD  1680
GYYKRRKNQL IRTSLESHTR RPVMLDENLN PGVKMALKAI SSIRLSKRRS QKVVAKTFKR  1740
SANSLVWTLC SSQSSENNSG SVTHQKVYPH LFPWKRTAYW RSTMQNWNLI SKCSSLAISG  1800
KLLLTRKRDT VYTRSINGFS LRKSKVLSVG GSSLKWSKSI DRHSKKANEE ATLAVAAVER  1860
KKREQKGATR ISSGAKDRNH SSRERTFRIG LCRYKMDPSR RTLQRISDDE SSFSATNPDK  1920
DAKRSYIPRR LVIGHKEYIR IGNGNQLIRD PKKRSRLLAS EKVRWSLHTA RLRLARKRKY  1980
CQFFTRFGKC NKDNGRCPYI HDPSKIAVCT KFLNGLCSNA NCKLTHKVIP ERMPDCSYFL  2040
QGLCTNQSCP YRHVNVNPKA ITCEGFLKGY CADGNECQKK HSYVCSTFEA TGTCPQGSKC  2100
KLHHPKNRIQ EKKRKQSREV RNARGRYFGS PDLRVFESKK PLFEKNFAQD YNDIISDGSL  2160
SDFIAIDVSD DDFGEYNDAA SEQTTFCDSD TSDLQQEDLD ELIKPIRLMD ASMTS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1724	1733	RLSKRRSQKV