PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON60338.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

TCP

Protein Properties

Length: 199aa MW: 20824.5 Da PI: 9.098

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON60338.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	115.4	7.6e-36	47	148	7	89
TCP 7 rhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsssg............... 88 + ++hTkv+gR+RRvR++a caar+F+L++eLG+ +d++tieWLl+qa+p+i+++tg++s +a + +a++ssss+s++s++ PON60338.1 47 ASRDRHTKVNGRGRRVRMPAMCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGSGSAPAGPVftSAAASSSSSSAPSASvpcrvqpivavtggs 145 578********************************************************9999965555444444444444444445555555555555 PP TCP 89 ..k 89 PON60338.1 146 gvF 148 550 PP

Sequence ? help Back to Top
Protein Sequence Length: 199 aa Download sequence
MGSEITLHNP STSTGHHLNP DSAAVVPASP AAKTQIAVSR KASSAAASRD RHTKVNGRGR 60 RVRMPAMCAA RIFQLTRELG HRSDGETIEW LLRQAEPSII AATGSGSAPA GPVFTSAAAS 120 SSSSSAPSAS VPCRVQPIVA VTGGSGVFAV ASPPSCRLDL CQPVPVPLEF RHMPFTTLLL 180 QSATTEAEQR QQEEALREH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37000.1	1e-28	TCP family protein