PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON60409.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family B3
Protein Properties Length: 157aa    MW: 18175.8 Da    PI: 9.9931
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON60409.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.11.6e-13691401588
                 -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
          B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                  +++p +fa+++  +  +s  +tle ++g++  v+ +   +s++  l kGW +F ++n L+egD+++F+l++++
  PON60409.1  69 YVYVPADFARNYLPN--SSELITLEARNGEQRVVTSNGYPSSCSERLDKGWGRFLRENYLEEGDVCIFELINSK 140
                 4799*****999533..55678888888866666665588888899***********************99755 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MSEKTSQRNI PVTHEDGEDC FVPKSLRHKN KNSRFAKPRD KKKAIKAATM NKLNNPSFMI  60
IIKPHNKTYV YVPADFARNY LPNSSELITL EARNGEQRVV TSNGYPSSCS ERLDKGWGRF  120
LRENYLEEGD VCIFELINSK IIVLKVWMYR VADYASR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.11e-16B3 family protein