PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON60410.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family B3
Protein Properties Length: 542aa    MW: 61402.9 Da    PI: 7.5657
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON60410.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3345.2e-1138123798
                 .-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   7 psdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                  ++ l++  +++p kfa  +g++   s   tl+ ++g++W v+l  +k +++ ++l +G keF +   +  g +++F ++g+sef   v++++
  PON60410.1  38 EKNILEH-KMRIPTKFAMIFGEQ--LSEVATLTVPDGKTWHVRL--KKEREKnIWLLDGFKEFMNYYSIHYGHILLFIYQGSSEF--SVRICE 123
                 4444555.5********555644..78899**************..666666689999*********************999999..999986 PP
2B349.48e-16436527799
                 .-HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
          B3   7 psdvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                 +++ +k +++ +p +f+++h+++ ++s++++l+   + ++W  k++++   +r+ +++GW  F+ + +LkegD++vF+l+++ ++ +l+v ++r+
  PON60410.1 436 KPYIMKGNIVNVPVEFVRRHNLD-RCSTDIQLQAhNEKQRWPAKCTFTA--SRVRISQGWGPFAASENLKEGDVCVFELISKqKQISLKVWIYRA 527
                 788899999***********999.79*******966779******5555..55779************************887999999999875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 542 aa     Download sequence    
MASMRRNRLR RVTPGGNHHR QSDSPPTPPP LFAAVMLEKN ILEHKMRIPT KFAMIFGEQL  60
SEVATLTVPD GKTWHVRLKK EREKNIWLLD GFKEFMNYYS IHYGHILLFI YQGSSEFSVR  120
ICEGIGSEID YPNHGPAGND IGEPNLDNHN EEDMADHDDQ ISVEILDSDS SLSHGSSDKH  180
EEHTSDGDDN EMDTTDDDRS VEIFESDSQF SHGSSDKHEE HTSDDDSMEI LDPTSHGWSK  240
GKSCNIGRVE DKSFEKSKNI SSPRKRGRLR KQGRSATSMV GVKFLDMNPP TFSGSFKSKA  300
FNNIGHVEEK SFGRVHEIGS SSKSKASNII GHVEQESYGK GRPSFSPWKR DRPRKQETSA  360
SPMDSLPSPF HAKTNKPKVS YNKSCMIEED ADQMLVPRTL SFTKSRRLFM SRETEQAVRA  420
AIVSKLGNPS FMLILKPYIM KGNIVNVPVE FVRRHNLDRC STDIQLQAHN EKQRWPAKCT  480
FTASRVRISQ GWGPFAASEN LKEGDVCVFE LISKQKQISL KVWIYRAADY AAEPIPKRII  540
TE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-22B3 family protein