PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON60411.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

Protein Properties

Length: 453aa MW: 51694.2 Da PI: 9.9071

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON60411.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	43.6	5.3e-14	346	438	9	98
HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE- CS B3 9 dvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfr 98 ++++ l +p +f+++h+ ++ t++++ + r+W v++ + +++ +++GW +F ++ LkegD++vF++++ +e l+v ++r PON60411.1 346 FIMSQHALDVPAEFVKRHMRW--CPETIQVQAcDEKRKWPVRCFFkfpTRSCTIKRMGRGWGSFSTSQSLKEGDVCVFEMINMvKEVVLRVLIYR 438 4567788*********855..8889999996777***877776666669999*******************9986677766776666 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MEAMQRTRRR KIRPCGNHRR KSDSPPKTTL LFALVMNETA IVEYKLRIPT KSATIFGEEL 60 SEWAALTVPS GHGPWQVKVK KKLNTNGGKN IWLIDGLEEF IKYYSIHFCS ILQFTYQGNS 120 VFSVRICDAL GSEIEYPFND SMSEEYGEKD LSNDDDHSVE LVDSRPPISR GSIGKQEEDT 180 RVDDHSVEIL DIKQTISHGS STRKALNGGL QKESLGKSTR QVFAQRERGK HRKRGGDAAF 240 MDHRVRSEFL YGTRSKSHVK EEQEEVKELG NADISGRSKL IGNTNKSGLC DFPVKRDEDV 300 QMILPRIFTY SRGKGPMMSK ETDKAARAAF ACKLRNPSFM VVITPFIMSQ HALDVPAEFV 360 KRHMRWCPET IQVQACDEKR KWPVRCFFKF PTRSCTIKRM GRGWGSFSTS QSLKEGDVCV 420 FEMINMVKEV VLRVLIYRAA DYAGRPEKRL KSK

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MEAMQRTRRR KIRPCGNHRR KSDSPPKTTL LFALVMNETA IVEYKLRIPT KSATIFGEEL  60
SEWAALTVPS GHGPWQVKVK KKLNTNGGKN IWLIDGLEEF IKYYSIHFCS ILQFTYQGNS  120
VFSVRICDAL GSEIEYPFND SMSEEYGEKD LSNDDDHSVE LVDSRPPISR GSIGKQEEDT  180
RVDDHSVEIL DIKQTISHGS STRKALNGGL QKESLGKSTR QVFAQRERGK HRKRGGDAAF  240
MDHRVRSEFL YGTRSKSHVK EEQEEVKELG NADISGRSKL IGNTNKSGLC DFPVKRDEDV  300
QMILPRIFTY SRGKGPMMSK ETDKAARAAF ACKLRNPSFM VVITPFIMSQ HALDVPAEFV  360
KRHMRWCPET IQVQACDEKR KWPVRCFFKF PTRSCTIKRM GRGWGSFSTS QSLKEGDVCV  420
FEMINMVKEV VLRVLIYRAA DYAGRPEKRL KSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	7e-17	B3 family protein