PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON60641.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family NAC
Protein Properties Length: 324aa    MW: 36649.8 Da    PI: 7.0146
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON60641.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM108.39e-34622021128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sgyWka 85 
                 lp+G++F+Ptd+e++ e+L++kv++++      ++++   ++   +i++++P++Lp  v ++ +  +fF++ +k+y+tg+rk+r+++      + +W++
  PON60641.1  62 LPAGVKFDPTDQEIL-EHLEAKVHSDSgklhplIDEFIPtLEGEnGICYTHPEKLP-GVGKDGQIRHFFHRPSKAYTTGTRKRRKVNtdedgsETRWHK 158
                 799***********9.99******9997775443332222443336**********.566666777******************744456555788*** PP

         NAM  86 tgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                 tgk+++v++ +g ++g kk+Lv+y   gr++k+ekt+Wvmh+y+l
  PON60641.1 159 TGKTRPVFV-GGGVKGFKKILVLYtnYGRQRKPEKTNWVMHQYHL 202
                 *********.999***********66589**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MTWCNESDEE RANINHLITP TSNNDAATTI TADQSRTTIT CPSCGHHIEF QDQAGIHDLP  60
GLPAGVKFDP TDQEILEHLE AKVHSDSGKL HPLIDEFIPT LEGENGICYT HPEKLPGVGK  120
DGQIRHFFHR PSKAYTTGTR KRRKVNTDED GSETRWHKTG KTRPVFVGGG VKGFKKILVL  180
YTNYGRQRKP EKTNWVMHQY HLGNNEEEKD GELVVSKVFY QTQPRQCGSI IKDQSIFDTS  240
TINIRSGFDD HHHDHSHLAK KAALHHVEYN YNPNPFLNYD DEGPHNRESP PQLIPNLVVQ  300
GDGSSFIHRL TTDASKGKLE RKII
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28470.11e-117NAC family protein