PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON61055.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

LBD

Protein Properties

Length: 322aa MW: 36416.5 Da PI: 6.3997

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON61055.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	121.6	4.1e-38	10	109	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 aCaaCk++rr+C+++C+lap fp +qpk f+n+hklFG+sn+lk+lk+l++e++ +am s++y+A+ r rdPv+G++g i +l+ q+ ++++el+++++ PON61055.1 10 ACAACKYQRRRCSPECPLAPFFPPDQPKLFQNAHKLFGVSNILKILKRLEPEQKATAMWSIIYQANERDRDPVHGSLGRICQLRYQIWHTEQELSAVQA 108 7**********************************************************************************************9997 PP DUF260 100 e 100 + PON61055.1 109 R 109 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MTLKGGTSQA CAACKYQRRR CSPECPLAPF FPPDQPKLFQ NAHKLFGVSN ILKILKRLEP 60 EQKATAMWSI IYQANERDRD PVHGSLGRIC QLRYQIWHTE QELSAVQARL EMCRQQQQHQ 120 HPMMPSMAPH HHDHDHQHHP QDLVMNSQLE LGMAPPSNAV PILNNDHTPQ PYNTHVMTGL 180 PMIQQHQQAY SRNNASTLNS AAAFVDSKEI NSNNEGNPLW AQYPYTSTTY NGNNNNSSVA 240 MQSQPLIGSQ PPEIQQEVVQ DYDEMPFFDT MDDRQSYIDS KEAYGQSSSE ESVLKDTTQS 300 IDHVANNELK NAAARLSLTS VN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47870.1	4e-52	LBD family protein