PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON61113.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 470aa    MW: 50499 Da    PI: 8.0073
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON61113.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3100.21.2e-31130232199
                 EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 
                 f+kv tpsdv+k++rlv+pk++ae++    ++ +e++  l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++ g  ++ +l++
  PON61113.1 130 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldSSTNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQR-GVcDKDRLFI 227
                 89***************************966778999*************************************************6.4557778999 PP

                 EEE-S CS
          B3  95 kvfrk 99 
                  ++r+
  PON61113.1 228 DWRRR 232
                 99997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    
MDFGSSARGT AHMGFSHHHE DHHIELLNTT TTAMARGNNN YYAKLPNFSN YSSSPPSSSS  60
SPGYAAAAAS AGRGGVGPTS WAADGSPIDD QMVAMNGPDT KLELMNSSSP RNEDGAVSMS  120
SRSVEREHMF DKVVTPSDVG KLNRLVIPKQ HAEKYFPLDS STNEKGLLLN FEDRNGKPWR  180
FRYSYWNSSQ SYVMTKGWSR FVKEKKLDAG DIVSFQRGVC DKDRLFIDWR RRPDAAPPEF  240
SSSSAAGAIN IPFSFGGHHH RSIPWSPSLM RAPAPPMSYG TIFNLHPYRN SYGGGGGGGG  300
GSGISTNGGG GSCYSGGYGN LMSSAGPVFY IRSSAAPTGI PQEEHPIGMV QPQLQHYHPA  360
VQQLEGSAVV FNSVPVVHGK AAAAGKRLRL FGVNMECSST TPTPDDQSEE CEHSMHICSS  420
NSSPSPHQTT SSQASLGQLR LYNGTPIPGI STVDFLNKGK ASMSTFNFDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61970.13e-66B3 family protein