PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON61185.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

SBP

Protein Properties

Length: 422aa MW: 45807.8 Da PI: 8.0772

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON61185.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	124.7	3.8e-39	174	251	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC++ l +ak+yhrrhkvCe+hskap+v+vsg eqrfCqqCsrfh +sef+e+krsC+rrLa+hnerrrk+++ PON61185.1 174 RCQVEGCHVALVKAKDYHRRHKVCEMHSKAPKVMVSGSEQRFCQQCSRFHVVSEFEESKRSCKRRLAGHNERRRKSSH 251 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MEIGGSNTLG SRGQNVNINI GTTSTLAWDM WELSNSNTTR MDWTTTSTTT GDKVSLYTTS 60 ESTGTADEGP TSGPRTHGSG SGQGPLVFRG YGEQGVVGLH HHHPDPHLVC LKLGKRHYFE 120 DTSGSAAGPG PVGERHLAGF PMGMMKRGKA NLHSAGCGIA APAAPSLLPA AVPRCQVEGC 180 HVALVKAKDY HRRHKVCEMH SKAPKVMVSG SEQRFCQQCS RFHVVSEFEE SKRSCKRRLA 240 GHNERRRKSS HDSIARSSSH HASTTGRALS LLSSRTDYSW VPPSESDLSS RSSAALRELI 300 AENRAAILAR QLILDKDTWH SSHHHPGDDQ DFSANASAQR GGGGASAVFG PIESHHHQMF 360 PPEPHQGWER MNENGAHVTL DLMQPPSPAF GTFMSSRGKT KSEEEDCSDH HLWNSFQGHN 420 LV

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MEIGGSNTLG SRGQNVNINI GTTSTLAWDM WELSNSNTTR MDWTTTSTTT GDKVSLYTTS  60
ESTGTADEGP TSGPRTHGSG SGQGPLVFRG YGEQGVVGLH HHHPDPHLVC LKLGKRHYFE  120
DTSGSAAGPG PVGERHLAGF PMGMMKRGKA NLHSAGCGIA APAAPSLLPA AVPRCQVEGC  180
HVALVKAKDY HRRHKVCEMH SKAPKVMVSG SEQRFCQQCS RFHVVSEFEE SKRSCKRRLA  240
GHNERRRKSS HDSIARSSSH HASTTGRALS LLSSRTDYSW VPPSESDLSS RSSAALRELI  300
AENRAAILAR QLILDKDTWH SSHHHPGDDQ DFSANASAQR GGGGASAVFG PIESHHHQMF  360
PPEPHQGWER MNENGAHVTL DLMQPPSPAF GTFMSSRGKT KSEEEDCSDH HLWNSFQGHN  420
LV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	232	239	KRSCKRRL
2	236	247	KRRLAGHNERRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27370.3	8e-35	SBP family protein