PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON61186.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

SBP

Protein Properties

Length: 356aa MW: 38978.7 Da PI: 8.9153

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON61186.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.1	2e-41	204	281	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+egC+adls+ak+yhrrhkvCe+hska++v++sgl+qrfCqqCsrfh lsefD++krsCr+rLa+hn+rrrk+q+ PON61186.1 204 RCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVMASGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQQ 281 6**************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MLDYDWGNTS AIMLTGEEHE HPPGSDPTRQ TILDHYSNAQ TAFHQDNLLA AAPQAPTHAS 60 GFAHNHFSTT TANTHNHSHN HNQNHHHHSQ AQIHTTHHVH LPGLYDPRSY PGASSYAPPH 120 HPSMLSLDPV LGGGGGGGGG GHGGSGTFML VPKSEEVCRA QSDFSSRIGL NLGGRTYFSS 180 EDDFMNRLYR RPRPLDPGSA HSPRCQAEGC NADLSHAKHY HRRHKVCEFH SKASTVMASG 240 LTQRFCQQCS RFHLLSEFDN GKRSCRKRLA DHNRRRRKTQ QPVNQEINPK SSSAANARNP 300 SSDNVSRSPP DSGAQSTSPV TMAVSPPRIS LDCFRQRSYQ TTVSSGSSSS LFFSSG

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MLDYDWGNTS AIMLTGEEHE HPPGSDPTRQ TILDHYSNAQ TAFHQDNLLA AAPQAPTHAS  60
GFAHNHFSTT TANTHNHSHN HNQNHHHHSQ AQIHTTHHVH LPGLYDPRSY PGASSYAPPH  120
HPSMLSLDPV LGGGGGGGGG GHGGSGTFML VPKSEEVCRA QSDFSSRIGL NLGGRTYFSS  180
EDDFMNRLYR RPRPLDPGSA HSPRCQAEGC NADLSHAKHY HRRHKVCEFH SKASTVMASG  240
LTQRFCQQCS RFHLLSEFDN GKRSCRKRLA DHNRRRRKTQ QPVNQEINPK SSSAANARNP  300
SSDNVSRSPP DSGAQSTSPV TMAVSPPRIS LDCFRQRSYQ TTVSSGSSSS LFFSSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.1	7e-77	SBP family protein