PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON61393.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Protein Properties

Length: 522aa MW: 57596.1 Da PI: 6.1574

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON61393.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.5	5.7e-19	220	310	2	90
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 +k+l++sdv+++gr+vlpk+ aee ++ +e+++++++d s+r+W+++++y ++ks++yvl+ ++ +Fvk+ngL+ gD+++++ +++++ PON61393.1 220 KKELKNSDVGSLGRIVLPKREAEEKlpTLSDKEGIQVVMRDiYSNREWSLRYKYwsNNKSRMYVLE-NTGDFVKQNGLEIGDSITLY--EDECK 310 6899*********************555668899*7788***99888888889999.*****************9..44555 PP

Sequence ? help Back to Top
Protein Sequence Length: 522 aa Download sequence
MDNFPVPHFL TSNTSTTSTS TNNSSSVVQS TQPKLMATTS ATHDGSHNSI YEPCMSFWPS 60 STTASLTTTN ATTNATTPDQ YCYPAPRYFP HHDQGLQFPG GVCPGGAGRH RSGFGYRPRV 120 VAGQSSVGAV LVGVSEEQER RLLDAWTTKV ARSKRRLARQ RSLNLITRNC FPSSSSIATH 180 GASSATTLCD SRELPISGAG TRDLYTFCTP DKKRLRVLLK KELKNSDVGS LGRIVLPKRE 240 AEEKLPTLSD KEGIQVVMRD IYSNREWSLR YKYWSNNKSR MYVLENTGDF VKQNGLEIGD 300 SITLYEDECK NLGARPAPEP SCKRHLITNQ NTTLPDDKYV NSSNSTTNDD VYDNSNNIIS 360 KTAHYDSSSS LSYASYYSYE LARDEEDASL ALLIEQLNHK EQQEANSLVT TLSSHIEYGT 420 TTNASSYSYG HSNESRTTSS NYYGVVSGGG MSYTQSTTTI EAVQQTPPSS SSSSSSLSRV 480 EVHEGEDHLD DFFGGLGTLP EVDGQYEYYN YATLFDRIMS DN

Sequence ? help Back to Top

Protein Sequence Length: 522 aa Download sequence

MDNFPVPHFL TSNTSTTSTS TNNSSSVVQS TQPKLMATTS ATHDGSHNSI YEPCMSFWPS  60
STTASLTTTN ATTNATTPDQ YCYPAPRYFP HHDQGLQFPG GVCPGGAGRH RSGFGYRPRV  120
VAGQSSVGAV LVGVSEEQER RLLDAWTTKV ARSKRRLARQ RSLNLITRNC FPSSSSIATH  180
GASSATTLCD SRELPISGAG TRDLYTFCTP DKKRLRVLLK KELKNSDVGS LGRIVLPKRE  240
AEEKLPTLSD KEGIQVVMRD IYSNREWSLR YKYWSNNKSR MYVLENTGDF VKQNGLEIGD  300
SITLYEDECK NLGARPAPEP SCKRHLITNQ NTTLPDDKYV NSSNSTTNDD VYDNSNNIIS  360
KTAHYDSSSS LSYASYYSYE LARDEEDASL ALLIEQLNHK EQQEANSLVT TLSSHIEYGT  420
TTNASSYSYG HSNESRTTSS NYYGVVSGGG MSYTQSTTTI EAVQQTPPSS SSSSSSLSRV  480
EVHEGEDHLD DFFGGLGTLP EVDGQYEYYN YATLFDRIMS DN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28300.1	2e-41	B3 family protein