PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON61545.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 382aa MW: 43467.3 Da PI: 7.0694

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON61545.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61	2.4e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv++++++G ++W++ ++ g++R++k+c++rw +yl PON61545.1 14 KGPWTPEEDQKLVHYIHKHGHRSWRALPKLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	50.9	3.5e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++++E + +++++ lG++ W++Ia +++ gRt++++k++w+++l PON61545.1 67 RGNFSQDEKQTILHLHSILGNK-WSAIATHLP-GRTDNEIKNFWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MGRSPFCDED GVKKGPWTPE EDQKLVHYIH KHGHRSWRAL PKLAGLNRCG KSCRLRWTNY 60 LRPDVKRGNF SQDEKQTILH LHSILGNKWS AIATHLPGRT DNEIKNFWNT HLKKKLIQMG 120 FDPMTHQPRP DPFSSLPHFM ALANLRDLVQ FDHHHENHDY LTRLQFLHNL LTLQYSTSSA 180 SNYGNNADYD HILMEPYFSN MNTLINSVQI PVGQNNNKVS QIFSTTSQPL HYHDDHLDPV 240 QVPFSSTTST NSQLLPSNLM TNNGISSSTG HDEIMGHQRN NNSHDFTSMV ISSQGDNPPD 300 HHDHSPWLFL PPLFPSNNKI IIVNPPNFLS STGHQHERST SINSTIPEDY ASCSTSSYGG 360 PTSTSTSSYW PEIFLHDHDI IS

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MGRSPFCDED GVKKGPWTPE EDQKLVHYIH KHGHRSWRAL PKLAGLNRCG KSCRLRWTNY  60
LRPDVKRGNF SQDEKQTILH LHSILGNKWS AIATHLPGRT DNEIKNFWNT HLKKKLIQMG  120
FDPMTHQPRP DPFSSLPHFM ALANLRDLVQ FDHHHENHDY LTRLQFLHNL LTLQYSTSSA  180
SNYGNNADYD HILMEPYFSN MNTLINSVQI PVGQNNNKVS QIFSTTSQPL HYHDDHLDPV  240
QVPFSSTTST NSQLLPSNLM TNNGISSSTG HDEIMGHQRN NNSHDFTSMV ISSQGDNPPD  300
HHDHSPWLFL PPLFPSNNKI IIVNPPNFLS STGHQHERST SINSTIPEDY ASCSTSSYGG  360
PTSTSTSSYW PEIFLHDHDI IS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34670.1	3e-96	MYB family protein