PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON61628.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 255aa    MW: 28576.8 Da    PI: 5.5692
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON61628.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.7e-192474155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++ykGVr +k +g+Wv+eIr p++   r r++lg+++t+e+Aa+a +aa  +l+g
  PON61628.1 24 PKYKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDTPEKAARAFDAAQFCLRG 74
                79*****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MVKTSTSNSE QAYSSTSVEH HECPKYKGVR KRKWGKWVSE IRLPNSRERI WLGSYDTPEK  60
AARAFDAAQF CLRGPHAHFN FPGSPPDIAG GQSLSPQEIQ VVAARFANDN IIDDSSCQEP  120
NPSYPPESGE SSHRGRGSSD IIDHDHQQYY SFDASIDTTT IAGHHHQYHN HDHDISTMDW  180
SLLNFLDYSN DHGGAYYDNF DPFPGLHDDK MHSGEFCAPV LPAAPDNNST RGADQINGDD  240
PFNSHDAHSS FLWNF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12733KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.16e-46ERF family protein