PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON61668.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family C2H2
Protein Properties Length: 212aa    MW: 23098.6 Da    PI: 9.4942
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON61668.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.000254567123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                +kC+ C ++F ++  L  H++ H
  PON61668.1 45 FKCQFCRRVFANSQALGGHQNAH 67
                89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MSDHSPSTTS STLKLFGFPI TENGEVLQVE RPDHQTSIWE ENRKFKCQFC RRVFANSQAL  60
GGHQNAHKRE RQRVSAQFQG RGPHLVGEVS SGPVLSPHSV RSSSSSSPSA ASVYTAGRFT  120
SIDNTSGTTT RCAVRFDRSQ AVTLNYPPSQ AAFVEPSYSS YRVPNYNSHY CLMSLRPAEQ  180
LVGANTTVLS SSNTTSKAEV GVDLHLKLSL SG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06650.11e-11C2H2 family protein