PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON61678.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 440aa MW: 48905 Da PI: 5.0638

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON61678.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.6	5e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grWT+eEde+lv++++ G g+W++ ++ g+ R++k+c++rw +yl PON61678.1 14 KGRWTAEEDEILVKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	49.3	1.1e-15	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + eE++++v++ + lG++ W++Ia +++ gRt++++k++w+++l PON61678.1 67 RGNISSEEEDIIVKLRATLGNR-WSLIATHLP-GRTDNEIKNYWNSHL 112 7899****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MGRAPCCEKV GLKKGRWTAE EDEILVKYIQ ANGEGSWRSL PKNAGLLRCG KSCRLRWTNY 60 LRADLKRGNI SSEEEDIIVK LRATLGNRWS LIATHLPGRT DNEIKNYWNS HLSRKIHTFR 120 RFTTTSTDQT LPNIMEITKV NVPPKRKGGR TSRSAMKKNS EGSLQRKNNT NIKDGLGLDH 180 HHHHQDEVNL SGPQTSTMEK ETLSFTNIDR DPYLSDQRQP LSPCQEAGGG GGGGAIRQVV 240 SSSELGQLSL CPSEGKTTEN SMSLGRPSFE KEGGHDEVFG PYDEECIGDG MLLCFNDIID 300 KELLNPNGVL TLSEESLNVS GALTTRTTNN GSNTISNYNV ASNNEELEIG TSGNLSSNGE 360 VGDWLDDVVG VDFWGNWESS TSSATSVTQG HDHEMWDNEK EKMLSLLWDS DNSWEIEDNN 420 HNFEEINSDK QNAMVAWLLS

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MGRAPCCEKV GLKKGRWTAE EDEILVKYIQ ANGEGSWRSL PKNAGLLRCG KSCRLRWTNY  60
LRADLKRGNI SSEEEDIIVK LRATLGNRWS LIATHLPGRT DNEIKNYWNS HLSRKIHTFR  120
RFTTTSTDQT LPNIMEITKV NVPPKRKGGR TSRSAMKKNS EGSLQRKNNT NIKDGLGLDH  180
HHHHQDEVNL SGPQTSTMEK ETLSFTNIDR DPYLSDQRQP LSPCQEAGGG GGGGAIRQVV  240
SSSELGQLSL CPSEGKTTEN SMSLGRPSFE KEGGHDEVFG PYDEECIGDG MLLCFNDIID  300
KELLNPNGVL TLSEESLNVS GALTTRTTNN GSNTISNYNV ASNNEELEIG TSGNLSSNGE  360
VGDWLDDVVG VDFWGNWESS TSSATSVTQG HDHEMWDNEK EKMLSLLWDS DNSWEIEDNN  420
HNFEEINSDK QNAMVAWLLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47460.1	1e-78	MYB family protein