PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON61717.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 634aa    MW: 71665.3 Da    PI: 5.5286
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON61717.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS271.23.3e-832416221374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn....sseelaal............kl 83 
                 lv+lLl++Ae v  ++  +a++lL   + las++++p++R+++ f+e L++++ ++  +  + +++s++++++         + +             +
  PON61717.1 241 LVHLLLAAAEKVGYQQYDRATRLLRSCQLLASSRANPVERVVFLFAESLREKIDKENGTSTRRISTSNSTTTTivrkR----KNTeiayglstniisVT 335
                 68*****************************************************66666666777777766644431....33323334544444333 PP

        GRAS  84 fsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp...egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefn 179
                  ++  P+l + ++ a qaI+e++e+e+++H+iD++i  G+QW  L+qaLa R+   ++   l+iT+vg+   +++ +++et++rL ++Ae+l++pf+f+
  PON61717.1 336 CHQQLPFLHVLQFPAIQAIVESFESETKLHVIDLEIRSGTQWTGLMQALAGRNdqdRPLELLKITAVGK--MHNQVKIKETQNRLMNLAESLNIPFSFK 432
                 88999***********************************************984344459********..559************************* PP

        GRAS 180 vlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                 +++ +++ed++ + ++++++EalaV ++l l  + +++ +le+    +++++  l+P ++vv+e ea++ns+sF++rf+eal +y a+fds+e+ + ++
  PON61717.1 433 PVILSDMEDINEDLFETEEDEALAVYSSLLLRMMISRPRCLEK----LMRVITCLKPSIMVVIEVEANLNSPSFANRFIEALFFYGAFFDSFETCI-KQ 526
                 *****************************99999988888888....***********************************************97.77 PP

        GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +e ++++E+  l+  i+n+va+e+ er++r  +++ Wr+ +e+  + +++ls++   qa+l+ ++++ +    +e + ++l+ gWk+ p+ s+SaW+
  PON61717.1 527 AEFKTTMEEI-LSMGIRNIVATENGERVNRSVSVGVWRAFFERYRMVEMKLSDSSLYQASLVAKQFGcGSSLGIERSGKCLMVGWKGTPIHSLSAWK 622
                 7899999998.********************************************************999999***********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 634 aa     Download sequence    
MANNPSFFVS PFNFDEIRGS GYGPSSTISD NQMDELQVLI KPKMNHFCGM GNLGAYDDDQ  60
YGCFYQHNNK VEKGVLVADL SEDQHEQQQE PKSNYSIFDD LDTNFAAFPP TQTINEGTTD  120
HQHACHDIKH MPASTTQTSL FASLEILRNY ESGLKKLNNP GKNEILSDAE GGNNCETSYP  180
MRRQKLSTEE TIRIAGSMYI QFYNSQETND VVQYHDFYTP MHPFGYALSG LSQGETKDVE  240
LVHLLLAAAE KVGYQQYDRA TRLLRSCQLL ASSRANPVER VVFLFAESLR EKIDKENGTS  300
TRRISTSNST TTTIVRKRKN TEIAYGLSTN IISVTCHQQL PFLHVLQFPA IQAIVESFES  360
ETKLHVIDLE IRSGTQWTGL MQALAGRNDQ DRPLELLKIT AVGKMHNQVK IKETQNRLMN  420
LAESLNIPFS FKPVILSDME DINEDLFETE EDEALAVYSS LLLRMMISRP RCLEKLMRVI  480
TCLKPSIMVV IEVEANLNSP SFANRFIEAL FFYGAFFDSF ETCIKQAEFK TTMEEILSMG  540
IRNIVATENG ERVNRSVSVG VWRAFFERYR MVEMKLSDSS LYQASLVAKQ FGCGSSLGIE  600
RSGKCLMVGW KGTPIHSLSA WKFLTSIDSV KCFD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.12e-51GRAS family protein