PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON61868.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 312aa    MW: 35617.1 Da    PI: 5.6345
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON61868.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.41.9e-06184227654
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                 +++ r RR++i ++ +eL +l+P  +      K++ ae+   A +YIk L
  PON61868.1 184 SIAARERRRKITEKTQELGRLIPGgN------KMNTAEMFHAASKYIKFL 227
                 67889******************955......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MALSFCSNWG THSLQHLINQ EIFSFPQTQL LELESDIESP QYLFDNFDYD FSLPDTSIDP  60
IFFDTSYNSS YSNKIYNDIL IPNFHNPTHY LVPDHDNFSP QTTFSGPKRQ KMYQNQCPFN  120
ATTSEFSKGY FPDPGLIQEF LPQPQNHDNV IYVPPQVVYS CGNKEAEVKM QSSCSSTTVL  180
SAQSIAARER RRKITEKTQE LGRLIPGGNK MNTAEMFHAA SKYIKFLRAQ LAILQLIKSF  240
KEKKEGTSYI KGLEVLASPS VQEKLYSEEK CLVPKEFVQT LANDQEIRPK TFFNDISQLI  300
YANQSMAAVT SD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.11e-29bHLH family protein