PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON62086.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

TCP

Protein Properties

Length: 481aa MW: 54795.5 Da PI: 8.1002

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON62086.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	102	1e-31	181	340	4	133
TCP 4 kkdrhskih..TkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..ssssa..sec.......eaesssssasnsssg. 88 kkdrhski T + +R RR+Rls+e+a++fFdLqd+LGf ++skt+eWLl +a +ik+l+ + ++ s + e+++ +s+sns+++ PON62086.1 181 KKDRHSKIMmtTGKRPRHRRMRLSLEVARQFFDLQDMLGFERASKTVEWLLIKARSEIKKLAMEssT--TSptSPTppgaggiEKKTTANSNSNSTNNs 277 9****9644888899****************************************999552..432322234444443333333333222224 PP TCP 89 ..................kaaksaakskksqksaasalnlakesrakarararertrekmrik 133 +a ++++k++++ +++ + + ++ k+r+rarert+ k++++ PON62086.1 278 dyevvssldevavdiskpSATNKEMKKRQAISRPRCGFKRPRDRMDKKRERARERTKLKKSKR 340 466998999999998765555555566666666776677777788**********999877 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MFPSNTWNIG NDPPISFSHD QSLISNNKPY FLNETYNNIV TNTTPNSKHQ FFYFPSSPLF 60 EEENLVSLSH HQNHHDHHLL HNSSSQPLFV RENNNNNDIL STTDKPHVVV STADEPHSNK 120 DNINNYINKL DPTNPTNLQQ KQKQPRPDDL SDLRKNHIRY DDHDDQQQQQ QQIPRKRIML 180 KKDRHSKIMM TTGKRPRHRR MRLSLEVARQ FFDLQDMLGF ERASKTVEWL LIKARSEIKK 240 LAMESSTTSP TSPTPPGAGG IEKKTTANSN SNSTNNSDYE VVSSLDEVAV DISKPSATNK 300 EMKKRQAISR PRCGFKRPRD RMDKKRERAR ERTKLKKSKR ELLAVVNDDQ YVRLHDNQDL 360 KSHGLSSWSL ETGEEETGTQ SGQNNNSNNS LEAVVLQASS SSHHLDHYEF EEPLTGCWHN 420 VQEQYRTCSS TASAAVANLV EECSFLNEGK YHWSPSPSIF NSLQNAVTSG SGGSIPGQEV 480 S

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MFPSNTWNIG NDPPISFSHD QSLISNNKPY FLNETYNNIV TNTTPNSKHQ FFYFPSSPLF  60
EEENLVSLSH HQNHHDHHLL HNSSSQPLFV RENNNNNDIL STTDKPHVVV STADEPHSNK  120
DNINNYINKL DPTNPTNLQQ KQKQPRPDDL SDLRKNHIRY DDHDDQQQQQ QQIPRKRIML  180
KKDRHSKIMM TTGKRPRHRR MRLSLEVARQ FFDLQDMLGF ERASKTVEWL LIKARSEIKK  240
LAMESSTTSP TSPTPPGAGG IEKKTTANSN SNSTNNSDYE VVSSLDEVAV DISKPSATNK  300
EMKKRQAISR PRCGFKRPRD RMDKKRERAR ERTKLKKSKR ELLAVVNDDQ YVRLHDNQDL  360
KSHGLSSWSL ETGEEETGTQ SGQNNNSNNS LEAVVLQASS SSHHLDHYEF EEPLTGCWHN  420
VQEQYRTCSS TASAAVANLV EECSFLNEGK YHWSPSPSIF NSLQNAVTSG SGGSIPGQEV  480
S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	7e-21	TCP family protein