PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON62148.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 1179aa MW: 132973 Da PI: 8.1849

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON62148.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.9	2.6e-09	455	500	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r++WT++Ed+ l+ v++ G g+W Ia+ + ++Rt+ qc r+q PON62148.1 455 RNPWTAQEDKNLLLFVQEKGIGNWIDIAASLRTNRTPFQCLVRYQR 500 79***************************************99995 PP
2	Myb_DNA-binding	29.1	2.3e-09	509	552	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 WT+ Ed +l av+ +G +W ++a+ + g t+ qc +rw k PON62148.1 509 REWTKNEDAKLRSAVEAFGESDWQSVASVLE-GWTGTQCSNRWKK 552 68***************************.*********98 PP
3	Myb_DNA-binding	44.6	3.2e-14	562	605	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 grWT++Ed++l+ a ++G+++Wk+ a+ ++ gRt+ qc++rw + PON62148.1 562 GRWTADEDKRLKVAQLLFGPRNWKKTAQFVP-GRTEVQCRERWVN 605 8****************************.*********87 PP
4	Myb_DNA-binding	49.4	1.1e-15	615	658	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +WT+eEd++l+ a++++G W+++a+ ++ +Rt+++c+ rw +l PON62148.1 615 KWTEEEDLKLKAAIAEHGYC-WAKVASALP-RRTDNMCRRRWKRLL 658 8***************99.*****.*********9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 1179 aa Download sequence
MAPRAENGEG EEEEEEGERD MFNSEEEGED DDVLDEDMEA LRRACMITGT NPDHLLHANA 60 SPPSPSPSPA PDAAGESIFA AADEDGDVDD LELVRNIRNR FSTSSELFEP LSLRPLCVLP 120 PAMSDDDGEE DDDFETLRAI QKRFAAYSND ALINSTENFL EKDEKVHDPG LSLEKGSYSD 180 LSIDGIDVCK GFSSSENACQ TTPQLGHHEE RQPSASIEWH HRDPSNPLTS QPKYSSFPKS 240 AKVFMDAIKK NRSFQKILRT KLVQIEAKME ENKKLKERVK ILRDFQANCK RRTGRALSQK 300 KDSRVQLISR KKSWPSKDPK VHDKKIPTMY YGPVENSHVA NYRMALTKFP LSLDRKNWSE 360 NERKNLGKGI QQQFQETMLQ IMVDRLSGSG EYHDVSNDLD NILVSIKDFD ITPESIRGFL 420 PKVNWERLAS MYVVGRSGAE CESRWLNFED SLINRNPWTA QEDKNLLLFV QEKGIGNWID 480 IAASLRTNRT PFQCLVRYQR SLNVSILKRE WTKNEDAKLR SAVEAFGESD WQSVASVLEG 540 WTGTQCSNRW KKSLHPTREK VGRWTADEDK RLKVAQLLFG PRNWKKTAQF VPGRTEVQCR 600 ERWVNSLDPS LSWDKWTEEE DLKLKAAIAE HGYCWAKVAS ALPRRTDNMC RRRWKRLLPD 660 EVPLLQAAKR IQKAAFIANF VDRESERPAL CPSDFVPLPM ITSSEGINHS KKQTGKPRKA 720 KERNLKKSRE NTKGPKDVLG ITNCGEIETI DGHEAITRQA SQKSNLSKHG PDNKSKKRSH 780 KPPSKRKELT ERNGATECLL SRPERLNLTS DGDRTEPFGE INITSTKTRR APSKRQCTKM 840 RSACSRQQYS RNSTTNSGEH RLSNLSSEKS LVTGIATDVT LQHDGLLCLD STEIMVINGE 900 EIGMHGGNDK ITSAKSTGPT QYRRRNKGFE PAGGLQEVVL VPSQHNRRKK LKSGGIFCSD 960 QKVVTADDDI PLSCFVNNKS KKRKLKVNDC DSNPACRRLM IRQESEMLPE QGDTSHAESS 1020 MLSSIQDAEL THCDGRAFDR SSSCNVKSGL WMGNSTVVAS DNEPGRINQV GGRKVACQEP 1080 ANEMASIDLE SRRDGDDISL ASLVQKKKLN MEHQTSQSGT QAIPPSSLIR GSQLLSKREV 1140 SLDEPRREQV EEDNEVGDVT LASIVRNRSR KKRRLQSAE

Sequence ? help Back to Top

Protein Sequence Length: 1179 aa Download sequence

MAPRAENGEG EEEEEEGERD MFNSEEEGED DDVLDEDMEA LRRACMITGT NPDHLLHANA  60
SPPSPSPSPA PDAAGESIFA AADEDGDVDD LELVRNIRNR FSTSSELFEP LSLRPLCVLP  120
PAMSDDDGEE DDDFETLRAI QKRFAAYSND ALINSTENFL EKDEKVHDPG LSLEKGSYSD  180
LSIDGIDVCK GFSSSENACQ TTPQLGHHEE RQPSASIEWH HRDPSNPLTS QPKYSSFPKS  240
AKVFMDAIKK NRSFQKILRT KLVQIEAKME ENKKLKERVK ILRDFQANCK RRTGRALSQK  300
KDSRVQLISR KKSWPSKDPK VHDKKIPTMY YGPVENSHVA NYRMALTKFP LSLDRKNWSE  360
NERKNLGKGI QQQFQETMLQ IMVDRLSGSG EYHDVSNDLD NILVSIKDFD ITPESIRGFL  420
PKVNWERLAS MYVVGRSGAE CESRWLNFED SLINRNPWTA QEDKNLLLFV QEKGIGNWID  480
IAASLRTNRT PFQCLVRYQR SLNVSILKRE WTKNEDAKLR SAVEAFGESD WQSVASVLEG  540
WTGTQCSNRW KKSLHPTREK VGRWTADEDK RLKVAQLLFG PRNWKKTAQF VPGRTEVQCR  600
ERWVNSLDPS LSWDKWTEEE DLKLKAAIAE HGYCWAKVAS ALPRRTDNMC RRRWKRLLPD  660
EVPLLQAAKR IQKAAFIANF VDRESERPAL CPSDFVPLPM ITSSEGINHS KKQTGKPRKA  720
KERNLKKSRE NTKGPKDVLG ITNCGEIETI DGHEAITRQA SQKSNLSKHG PDNKSKKRSH  780
KPPSKRKELT ERNGATECLL SRPERLNLTS DGDRTEPFGE INITSTKTRR APSKRQCTKM  840
RSACSRQQYS RNSTTNSGEH RLSNLSSEKS LVTGIATDVT LQHDGLLCLD STEIMVINGE  900
EIGMHGGNDK ITSAKSTGPT QYRRRNKGFE PAGGLQEVVL VPSQHNRRKK LKSGGIFCSD  960
QKVVTADDDI PLSCFVNNKS KKRKLKVNDC DSNPACRRLM IRQESEMLPE QGDTSHAESS  1020
MLSSIQDAEL THCDGRAFDR SSSCNVKSGL WMGNSTVVAS DNEPGRINQV GGRKVACQEP  1080
ANEMASIDLE SRRDGDDISL ASLVQKKKLN MEHQTSQSGT QAIPPSSLIR GSQLLSKREV  1140
SLDEPRREQV EEDNEVGDVT LASIVRNRSR KKRRLQSAE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	776	780	KKRSH
2	947	984	RRKKLKSGGIFCSDQKVVTADDDIPLSCFVNNKSKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18100.1	0.0	MYB family protein