PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON62207.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WRKY

Protein Properties

Length: 669aa MW: 71926.4 Da PI: 6.6486

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON62207.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.5	1.9e-30	393	451	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ PON62207.1 393 ADGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILVTTYEGNHNHP 451 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 669 aa Download sequence
MAKGSGLSID SDPIGFFIHK PTVLNSFQQD YNNNNNHHKK INYKPLLPSP SMDTTTIHER 60 SSPSPPPPPH PTLQFPVNLN CAHQVDSPAQ SDENRTVIDE MDFFADNRNR DTKASPSSHD 120 HDIGDHHKTL DDHQIDIEMN VNTGLNLLTT NTSSDQSMVD DGISNDVAAD NKKAKTYQLA 180 VLHAEFERMK AENQRLKNML NQVTNNYNAL QMHLFALMQN QNQNRKPENS SDGHGLVDGK 240 VELDDDHDHD HRQKKIIKLG SNNDQGGGGG APPVVPRTFM DLGLAAAANG GEADETSLSS 300 SEERRSESVK DGHGGGDELE KNKEVNRALM GIREREESPD QSSQGNWGQN NSSNKVPRTT 360 SSGSVKDAPD QTEATMRKAR VSVRARSEAP MIADGCQWRK YGQKMAKGNP CPRAYYRCTM 420 AAGCPVRKQV QRCAEDRTIL VTTYEGNHNH PLPPPAMAMA STTSSAARML LSGSMSSSEG 480 IMNSNFLART MLPCSSSMAT ISASAPFPTV TLDLTQSPNP LHLQKPPQQP QFHLPLPPNP 540 SLANAGPTAA AAAAAALLPQ IFGQAIYNNQ SKFSGLQVSS IGQENSMVPP GARLGHQSPP 600 QPNQLGQGQN SFSDSVTAAT AAIAADPNFT AALAAAITSI ISGAHPNNVS NNNNNANNGN 660 GNATTSNTN

Sequence ? help Back to Top

Protein Sequence Length: 669 aa Download sequence

MAKGSGLSID SDPIGFFIHK PTVLNSFQQD YNNNNNHHKK INYKPLLPSP SMDTTTIHER  60
SSPSPPPPPH PTLQFPVNLN CAHQVDSPAQ SDENRTVIDE MDFFADNRNR DTKASPSSHD  120
HDIGDHHKTL DDHQIDIEMN VNTGLNLLTT NTSSDQSMVD DGISNDVAAD NKKAKTYQLA  180
VLHAEFERMK AENQRLKNML NQVTNNYNAL QMHLFALMQN QNQNRKPENS SDGHGLVDGK  240
VELDDDHDHD HRQKKIIKLG SNNDQGGGGG APPVVPRTFM DLGLAAAANG GEADETSLSS  300
SEERRSESVK DGHGGGDELE KNKEVNRALM GIREREESPD QSSQGNWGQN NSSNKVPRTT  360
SSGSVKDAPD QTEATMRKAR VSVRARSEAP MIADGCQWRK YGQKMAKGNP CPRAYYRCTM  420
AAGCPVRKQV QRCAEDRTIL VTTYEGNHNH PLPPPAMAMA STTSSAARML LSGSMSSSEG  480
IMNSNFLART MLPCSSSMAT ISASAPFPTV TLDLTQSPNP LHLQKPPQQP QFHLPLPPNP  540
SLANAGPTAA AAAAAALLPQ IFGQAIYNNQ SKFSGLQVSS IGQENSMVPP GARLGHQSPP  600
QPNQLGQGQN SFSDSVTAAT AAIAADPNFT AALAAAITSI ISGAHPNNVS NNNNNANNGN  660
GNATTSNTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G04450.1	5e-89	WRKY family protein