PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON62293.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MIKC_MADS
Protein Properties Length: 308aa    MW: 34545.6 Da    PI: 4.8445
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON62293.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF88.14.7e-28958150
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                krien++nrqvtfskRrng++KKA+ELS+LCd+++a+i+fs++g+l  +s
  PON62293.1  9 KRIENNTNRQVTFSKRRNGLIKKAYELSILCDIDIALIMFSPSGRLSHFS 58
                79********************************************9997 PP
2K-box27.61.2e-1092162979
       K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqiee 79 
                 + +++ e+lqqe+ +L++++++ ++++R +  + L+  s++ L + e++L + l+++ ++K+ ll++q++ 
  PON62293.1  92 AVNSEIEELQQEIGRLQQQLQMAEEQIRMYEPDPLKITSMEKLDSCEKNLVDTLTRVMQRKELLLTNQLSS 162
                 567889**************************************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MGRVKLEIKR IENNTNRQVT FSKRRNGLIK KAYELSILCD IDIALIMFSP SGRLSHFSGR  60
RSEIQNKEHL LRTLQQLRSE SDIAFQFSNP AAVNSEIEEL QQEIGRLQQQ LQMAEEQIRM  120
YEPDPLKITS MEKLDSCEKN LVDTLTRVMQ RKELLLTNQL SSYEPSGISH QQVFPASFEN  180
TIAQIFDASA PLDQLRDLAS SVYDPFSQGT SSNADPSSMQ GECHVPINAG GDHGDHLQDW  240
THQAYNPTST GHLPSLVPSN MYSQIQQELG TSDIPEMVSH QQMEIPNPIG SSNVLQADNT  300
TEAANFGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77980.16e-81MIKC_MADS family protein