PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON62336.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

LBD

Protein Properties

Length: 235aa MW: 25855.9 Da PI: 6.583

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON62336.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	136.5	9.7e-43	53	152	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+Ca++Cvlapyfp ++p+kf ++h++FGasn++k+l++lpe++r da+ss+vyeA ar+rdPvyG++g i +lq+q+++l+a+la++++ PON62336.1 53 PCAACKILRRRCADKCVLAPYFPPTEPSKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICQLQKQVSELQAQLAKAQA 151 7**********************************************************************************************9997 PP DUF260 100 e 100 e PON62336.1 152 E 152 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MECSTETNNT TTTTTTSSPQ LASHYSTSSS SSPPQTPNPN PNPNPNPPIV ISPCAACKIL 60 RRRCADKCVL APYFPPTEPS KFTIAHRVFG ASNIIKFLQE LPESQRADAV SSMVYEASAR 120 IRDPVYGCAG AICQLQKQVS ELQAQLAKAQ AEVVNMQCQQ ANLVAFLCME MAQSQQGYND 180 SPPHHHHHYH HQQQNLDGPF NNITSPLMTS NQSNNSLSFL DDNNTLGSLW EPLWT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07900.1	7e-64	LBD family protein