PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON62427.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family E2F/DP
Protein Properties Length: 350aa    MW: 38544.9 Da    PI: 5.9033
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON62427.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP87.31.1e-2797179271
     E2F_TDP   2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                 ++++Lr++++k   ++ek+e+ g++t+neva+eLv+e                d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  PON62427.1  97 SGRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfadpgsgvttpdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 179
                 689********...*****999*******************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MGTRTQQPSR AEEDDDLPGL GTTTTTTTTV SGQSVSMSGS VGSPSSRSEQ TMATPASENT  60
FLRLNHLDIH GDDAGSQGAV GSKKKKRGQR AVGGDKSGRG LRQFSMKVCE KVESKGRTTY  120
NEVADELVAE FADPGSGVTT PDQQQYDEKN IRRRVYDALN VLMAMDIISK DKKEIQWKGL  180
PRTSLNDIEE LKTERLGLRN RIEKKTAYLQ ELEEQYVGLQ NLIQRNEQLY SSGNAPSGGV  240
ALPFILVQTR PHATVEVEIS EDMQLVHFDF NSTPFELHDD NYVLKAMKFC ETPQGDDVAH  300
NFSADGGEGS SRSSMYQTQI PLPSMSNTPV RNPTSPPLPG ILKARVKHEH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-159E2F/DP family protein