PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON62494.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family C3H
Protein Properties Length: 391aa    MW: 43197.6 Da    PI: 8.3169
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON62494.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH24.93.6e-08151171526
                 --SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                  C++f++ G+Ck Gd+C FaHg
  PON62494.1 151 ACPDFRK-GHCKKGDSCEFAHG 171
                 7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    
KKKKKFTASE KMMLGEQHRP NPTVHVPPWN LTVEDPTAEM YSPFPLSGVS VNSDCNGGDY  60
SPYYLQEALS ALSPYLPSAN DPDIDSDSDV SGRESDAPID AYSCDQFRMF EFKVRRCARG  120
RSHDWTECPY AHPGEKARRR DPRKFHYSGT ACPDFRKGHC KKGDSCEFAH GVFECWLHPA  180
RYRTQPCKDG TSCRRRVCFF AHTPDQLRVL PQQSPKGGSN SVESYDGSPL RKTLPFLSSP  240
SSISPPATPQ AESPPMSPMT QVLSRSLGSS SINEMVASLR NLQLGKVKSL PSCWNTQKGG  300
SPGFGSPRGS LLRPGFCSLP TTPTRGPARP SYLDFCDPAL EEEPAMERVE SGRGLRAKMF  360
ERLSKENSLD RVDPNPSAGA PDVGWVSELV K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.11e-135C3H family protein