PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON62496.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 275aa MW: 30130.2 Da PI: 6.1269

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON62496.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.1	5.5e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd l+++ + G+g +W + +r+ g++R++k+c++rw++yl PON62496.1 14 RGPWSPEEDATLKNYMDKNGTGgNWISLPRKAGLNRCGKSCRLRWLNYL 62 89*********************************************97 PP
2	Myb_DNA-binding	40.5	6.2e-13	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd + + + G++ W+ Ia+ ++ gRt++++k++w++ PON62496.1 69 GCFTEEEDNVIWTLYNNIGSR-WSVIASQLP-GRTDNDVKNHWNT 111 789****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence
MGRAPCCDKT KVKRGPWSPE EDATLKNYMD KNGTGGNWIS LPRKAGLNRC GKSCRLRWLN 60 YLRPDIKHGC FTEEEDNVIW TLYNNIGSRW SVIASQLPGR TDNDVKNHWN TKLKKLLATG 120 STSGNNNETT NNTRYHHLNL ARFAGLIPKT ESSDQGNSAC CDTNSDNSTY LMGGNYVDSF 180 DLKEPKFEPI SQLSYSNPVE VSDLGTNGNT SSSISSAREV SSLSTSSSNL AFDENTTGFA 240 SWSGIGGVNY IEDGINLVDM GFGPSNDVFL SGFGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36890.1	3e-67	MYB family protein