PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON62514.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 286aa MW: 32135.2 Da PI: 6.9979

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON62514.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.1	1.7e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++ Ede+l+d+vk +G g W+ +++ g++R++k+c++rw++yl PON62514.1 14 RGAWSAVEDEILADYVKIHGEGKWRDLPQRAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	51.9	1.7e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ +t+E++l+v+++k+lG++ W++Ia +++ gRt++++k++w++ PON62514.1 67 RGNISTDEEDLIVRLHKLLGNR-WALIAGRLP-GRTDNEIKNYWNTN 111 7899****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence
MGRKPCCEKE GLNRGAWSAV EDEILADYVK IHGEGKWRDL PQRAGLKRCG KSCRLRWLNY 60 LRPNIRRGNI STDEEDLIVR LHKLLGNRWA LIAGRLPGRT DNEIKNYWNT NLRKRVLDNI 120 GIKGQSSSEE LVKPATKRTQ LTAQHSSGHV IRTKAVRCPK VAIPSWLLLD DQDKNIIGQN 180 SVPLEEIMSD QSKSRSFSTT TTTSENVNSS DFLIDFDVGK FLMSDDDHQA KDQTGKSIGP 240 SSVDQIARCS FDDIYDPYLL VGDPFVQGLD DLDGISCFLN SGVEDQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	8e-64	MYB family protein