PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON62589.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family LBD
Protein Properties Length: 253aa    MW: 27882.1 Da    PI: 5.2507
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON62589.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260123.88.7e-397106199
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkC+++Cv+apyf++eq +++fa++hk+FGasnv+kll+++p ++r +a+ ++ yeA+ar++dP+yG+v++i++lqqq+ +l+a+la+lk
  PON62589.1   7 PCGACKFLRRKCVSGCVFAPYFCHEQgASHFAAIHKVFGASNVSKLLANIPVSDRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLATLK 105
                 7*************************89*******************************************************************9987 PP

      DUF260  99 e 99 
                 e
  PON62589.1 106 E 106
                 5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MAGSGSPCGA CKFLRRKCVS GCVFAPYFCH EQGASHFAAI HKVFGASNVS KLLANIPVSD  60
RCEAAVTISY EAQARLQDPI YGCVSHIFAL QQQVVNLQAQ LATLKELQAA QSFPNGLGTV  120
NPNGKFCGKV ESHDDDDHQY PRQDCRVPFG WFELENSNRV PQINSATSNL SSNFGTIMPC  180
YDKNGVLVNP NYPLGNKVDL IIPDENISYG SFEDTNSFSM SSFESMQPNN RPWAFQEYSD  240
EFQSTAFAYV QNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58190.15e-57LBD family protein