PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON62602.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 749aa MW: 83489.4 Da PI: 6.1907

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON62602.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.2	8e-05	580	617	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLrel+P+ a K s + Le++++++ +Lq PON62602.1 580 RQLIQDRIKELRELIPSgA------KCSIDSLLERTIKHMLYLQ 617 77899**********77......777778**********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 749 aa Download sequence
MGADLQQILR SLCFNTEWKY AVFWKLKHRA RMMLTWEDAY YDKSEQHDPA ENKCFSKKLE 60 MLHDGLYSHD PLGLAVAKMS YHVYSLGEGI VGQVAVSGKH QWIFADKHEM STCSSFEYSD 120 GWQNQFSAGI RTIAVVAVVP HGVVQLGSYN KVIEDMKLVT HIRDVFMALQ DSSLGHIPSP 180 IQSRMNSSIN LPDMPSKSFD SEVIPDCLHN LDKTLNGDRP DIWFSIFPYL GKDDDSSYVW 240 SLPGNHQEKA ADVVINRGGL ELPTIGADES SKLVQSEANL LDLEHHKVIG RNLRDYWKCG 300 GEISSCKVTA VGSVNDVSPL SHESVMCDVN LCNVVPAEKV EVDSAHFSSV PIDSALCDRV 360 RLDSVDYYQN GVLHVSEPSD IRFQKDLENL EFLAESSHMD TSSTSLKFPA GYELHEALGP 420 AFLKKSKYFD WEAMKSQGVV SEMPEQMSSS QLTSDSRPEH LLEAVVANVC PSHSDVRSEK 480 SFCKSVQSRL TTANYPEPSS RTTLITDSSN HSIDRASLVG EDTPHCLSSS GVCGATSPKG 540 YSSTCPSACS EQLERSSVPT KNNKKRARPG ENCRPRPRDR QLIQDRIKEL RELIPSGAKC 600 SIDSLLERTI KHMLYLQSIA KHADKLNKYT DVKSHKETSI LESSSYERGS SWAVEVGGNL 660 KVCSIIVENL NKNGQMVVEM MCEECGHFLE IAEAIKSLGL TILKGVTEAH GEKTWICFVV 720 EGQSNRSLHR MDILWSLVQI LQPKNAMQQ

Sequence ? help Back to Top

Protein Sequence Length: 749 aa Download sequence

MGADLQQILR SLCFNTEWKY AVFWKLKHRA RMMLTWEDAY YDKSEQHDPA ENKCFSKKLE  60
MLHDGLYSHD PLGLAVAKMS YHVYSLGEGI VGQVAVSGKH QWIFADKHEM STCSSFEYSD  120
GWQNQFSAGI RTIAVVAVVP HGVVQLGSYN KVIEDMKLVT HIRDVFMALQ DSSLGHIPSP  180
IQSRMNSSIN LPDMPSKSFD SEVIPDCLHN LDKTLNGDRP DIWFSIFPYL GKDDDSSYVW  240
SLPGNHQEKA ADVVINRGGL ELPTIGADES SKLVQSEANL LDLEHHKVIG RNLRDYWKCG  300
GEISSCKVTA VGSVNDVSPL SHESVMCDVN LCNVVPAEKV EVDSAHFSSV PIDSALCDRV  360
RLDSVDYYQN GVLHVSEPSD IRFQKDLENL EFLAESSHMD TSSTSLKFPA GYELHEALGP  420
AFLKKSKYFD WEAMKSQGVV SEMPEQMSSS QLTSDSRPEH LLEAVVANVC PSHSDVRSEK  480
SFCKSVQSRL TTANYPEPSS RTTLITDSSN HSIDRASLVG EDTPHCLSSS GVCGATSPKG  540
YSSTCPSACS EQLERSSVPT KNNKKRARPG ENCRPRPRDR QLIQDRIKEL RELIPSGAKC  600
SIDSLLERTI KHMLYLQSIA KHADKLNKYT DVKSHKETSI LESSSYERGS SWAVEVGGNL  660
KVCSIIVENL NKNGQMVVEM MCEECGHFLE IAEAIKSLGL TILKGVTEAH GEKTWICFVV  720
EGQSNRSLHR MDILWSLVQI LQPKNAMQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	0.0	bHLH family protein