PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON62657.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 506aa    MW: 56705.1 Da    PI: 6.7437
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON62657.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS326.93.8e-1001304972374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                  +lLlecA a+s ++l +a++++ +l ++asp++ +p +R++ayf++A+a+r+++s+ +++    +s+ +  n+ +  aa+++f+++sP++kf+h+t N
  PON62657.1 130 MTLLLECAVAISVDNLGEAHRMILELTQMASPYApSPAERVVAYFAKAMASRVVNSWLGVV---LCSPLPLVNHRSLHAAFQAFNNASPLVKFAHFTSN 225
                 579*******************************9********************999988...45555555688888999****************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgv.pfefnvlvak...rledlelee 193
                 qaIle++++ +r+HiiD+di+qGlQWpaL++ La+R+egpp +l +Tgvgs    s+e l++tg+ L++fA++lg+ +fef+++v +    l ++++++
  PON62657.1 226 QAILESFHRRDRLHIIDLDIMQGLQWPALFHILATRAEGPPsHLCVTGVGS----SQELLSQTGQHLSSFAKRLGIsSFEFHPVVRNpnsGLLNVDVSA 320
                 *************************************99888*********....99*******************55*****96654235777899** PP

        GRAS 194 LrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgr 292
                 +rv++gE+laV++    h l+d +++       ++klv +l+P+++++veq+++  s+sFl+rf+ +l+yys++fdsl a l++++ +r+ vE+ ll r
  PON62657.1 321 FRVRRGETLAVHWLR--HCLYDATGPDWR----TMKLVEELRPRIFTLVEQDVSQ-SGSFLDRFVGSLHYYSTMFDSLGAYLGTDDPNRHQVEHCLLYR 412
                 *************99..888877777777....********************98.899**************************************** PP

        GRAS 293 eivnvvacegaerrerhetlekWrerlee..aGFkpvplsekaakqaklllrkvk.sdgyrve.eesgslvlgWkdrpLvsvSaWr 374
                 ei n++a  g  r   +e+l+ Wr+ l++   G+++v++s + ++qa+l+l++++   gy++   ++g+l lgWkd  L+++SaW+
  PON62657.1 413 EINNMLAIGGPGR-SGEEKLRDWRSELGRrsGGLGQVAMSANCMAQAQLILNMYSpAYGYTLVqGNDGTLRLGWKDTCLYTASAWT 497
                 ***********95.55678********87658*****************************8725577777**************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 506 aa     Download sequence    
MKAGTFEMVH RALDMIQPHH HHDYLNSSTA SNIGFIPVQT SINQFPKPIN SELSEWIEQI  60
TKQLIDECPE TPSVETFQAT SADDNSNFVQ PTSISAEYFR PRKIPRTVEP SDHNHNHDHD  120
HQEQSLTKMM TLLLECAVAI SVDNLGEAHR MILELTQMAS PYAPSPAERV VAYFAKAMAS  180
RVVNSWLGVV LCSPLPLVNH RSLHAAFQAF NNASPLVKFA HFTSNQAILE SFHRRDRLHI  240
IDLDIMQGLQ WPALFHILAT RAEGPPSHLC VTGVGSSQEL LSQTGQHLSS FAKRLGISSF  300
EFHPVVRNPN SGLLNVDVSA FRVRRGETLA VHWLRHCLYD ATGPDWRTMK LVEELRPRIF  360
TLVEQDVSQS GSFLDRFVGS LHYYSTMFDS LGAYLGTDDP NRHQVEHCLL YREINNMLAI  420
GGPGRSGEEK LRDWRSELGR RSGGLGQVAM SANCMAQAQL ILNMYSPAYG YTLVQGNDGT  480
LRLGWKDTCL YTASAWTCTS TTTSNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.11e-117GRAS family protein