PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON62710.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

WRKY

Protein Properties

Length: 587aa MW: 63870.6 Da PI: 6.5075

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON62710.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.8	2.9e-30	338	396	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+a+d +++++tYeg+Hnh+ PON62710.1 338 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAsGCPVRKQVQRCADDRSILTTTYEGHHNHP 396 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 587 aa Download sequence
MDPAGEELGS RAMRAGDIGR KSWMVGELDF FADKTDLKAK QGVDHHHDDE HDHDHDQVDK 60 DQETGRDHEI LQPDDHDQGL KLELNTGLFL TTNTSSEKSS TLDDGSSGNV EDNKNKPIPN 120 ELAHMQFELD RLSSENHRLR GLLSQIGTDY QILHMHLSTL SQRQHNQNLE TPESDHSTKM 180 NMINGSKLEE NQRRFVVGSR QFMGIGREKD HEVSNSSLEG RSQNCASGSP QNEIVESMEC 240 KSTIISPTGL VNNKRPPSDS TDDHDQVHRE QVLPGRKWVP NKVGRFNNGT ASPDACRESS 300 SNKINNDQHE DPQASETMSM IRKARVSVRA RSDASMISDG CQWRKYGQKM AKGNPCPRAY 360 YRCTMASGCP VRKQVQRCAD DRSILTTTYE GHHNHPLPPA AMAMASTTSA AASMLLSGSM 420 PSGDHPHLHQ GLNFLPRTAH LPAACSASLA TLSASAPFPT VTLDLTRTPT SSSDQAILGQ 480 RPPFSQGGDN VNSVNLPQIL SQNVMSSPQV FGSKSLGLHN QGLLLNNSNP LDLVASDTVS 540 AATAAAITAD PNFTAALVAA ITSIIGNVKS NNNNTSSVTT RNGSEKN

Sequence ? help Back to Top

Protein Sequence Length: 587 aa Download sequence

MDPAGEELGS RAMRAGDIGR KSWMVGELDF FADKTDLKAK QGVDHHHDDE HDHDHDQVDK  60
DQETGRDHEI LQPDDHDQGL KLELNTGLFL TTNTSSEKSS TLDDGSSGNV EDNKNKPIPN  120
ELAHMQFELD RLSSENHRLR GLLSQIGTDY QILHMHLSTL SQRQHNQNLE TPESDHSTKM  180
NMINGSKLEE NQRRFVVGSR QFMGIGREKD HEVSNSSLEG RSQNCASGSP QNEIVESMEC  240
KSTIISPTGL VNNKRPPSDS TDDHDQVHRE QVLPGRKWVP NKVGRFNNGT ASPDACRESS  300
SNKINNDQHE DPQASETMSM IRKARVSVRA RSDASMISDG CQWRKYGQKM AKGNPCPRAY  360
YRCTMASGCP VRKQVQRCAD DRSILTTTYE GHHNHPLPPA AMAMASTTSA AASMLLSGSM  420
PSGDHPHLHQ GLNFLPRTAH LPAACSASLA TLSASAPFPT VTLDLTRTPT SSSDQAILGQ  480
RPPFSQGGDN VNSVNLPQIL SQNVMSSPQV FGSKSLGLHN QGLLLNNSNP LDLVASDTVS  540
AATAAAITAD PNFTAALVAA ITSIIGNVKS NNNNTSSVTT RNGSEKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	7e-60	WRKY family protein