PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON62830.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family NF-YC
Protein Properties Length: 123aa    MW: 13502.5 Da    PI: 7.5783
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON62830.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC96.81.7e-30181011898
       NF-YC  18 nhelPlarikkilk...adedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 
                  h+lPlarikki+k   + ++vkmis +aPv+++kacelfi elt +sw  + + krr l+k d+a+av  td+fdflv  v  
  PON62830.1  18 AHSLPLARIKKIMKrcgSGDEVKMISGDAPVVFAKACELFIKELTQKSWTLTLQGKRRILHKDDVASAVVATDVFDFLVGLVSD 101
                 599***********555579**********************************************************998875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    
MRQAGTYSGI RFGGGNGAHS LPLARIKKIM KRCGSGDEVK MISGDAPVVF AKACELFIKE  60
LTQKSWTLTL QGKRRILHKD DVASAVVATD VFDFLVGLVS DGDDYDHHAQ NLVPKERETV  120
LEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54830.31e-22NF-YC family protein