PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON62935.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 248aa MW: 28514.9 Da PI: 6.1023

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON62935.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	156.1	1.5e-48	4	135	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrF Pt+eelv++yL++k+e+k+ ++++vik +diy++ePwdLpk +++++++w+fF++r++++a+g r+nr+t+sgyWkatg+ v+s+ PON62935.1 4 LPPGFRFYPTEEELVSFYLRNKLEAKRDDINRVIKVIDIYSIEPWDLPKysgeLCQGDTEQWFFFTPRQEREARGGRPNRTTASGYWKATGSPSYVFSS 102 79**************************99************656654455777*********************************** PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++++g+kkt+vfykg+ap+g+kt+W m+eyr+ PON62935.1 103 DNRVIGVKKTMVFYKGKAPTGRKTKWKMNEYRA 135 *****************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MQELPPGFRF YPTEEELVSF YLRNKLEAKR DDINRVIKVI DIYSIEPWDL PKYSGELCQG 60 DTEQWFFFTP RQEREARGGR PNRTTASGYW KATGSPSYVF SSDNRVIGVK KTMVFYKGKA 120 PTGRKTKWKM NEYRAIEEVN NPNSVTTPML RHEFSLCRVY VISGSFRAFD RRPIKSIRDT 180 REQQGDQAGP SAQNTITMVE RAASSSPETS SSGDPAELPM AAGSGSTEWE MNDNLEQPLW 240 EWEQLNWP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	2e-94	NAC family protein