PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON62956.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

E2F/DP

Protein Properties

Length: 463aa MW: 50967.9 Da PI: 4.5863

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON62956.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	86.6	1.9e-27	142	207	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg PON62956.1 142 RYDSSLGLLTKKFINLIKHAEDGILDLNKAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 207 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MSGSRAPNPS AQPSEQITHP LKPSQLPFSS MKPPFSVPGD YHRFGPDPRQ LTDHEADAII 60 VKPPLKRKGD TADYEAESSD RAAGPKIVEV VNSSLQTPVS IKAGKATKTL RLTKCSKARP 120 QTPVSTVGSP SGPNLTPAGP CRYDSSLGLL TKKFINLIKH AEDGILDLNK AADTLEVQKR 180 RIYDITNVLE GIGLIEKKLK NRIQWKGLDV SRPGDADENY ASLQAEVENL SIEEHRVDEQ 240 IREMQERLRD LSEDENNQKW LFVTEDDIKG LPCFQNETLI AIKAPHGTTL EVPDPDEAVD 300 YPQRRYRVVL RSTMGPIDVY LVSQFEEKFE EINGVQVPAN FPSSSGVNEN PATTIGTENR 360 GKDIEVQGQH DQGISVDPNA PQDSVGGIMK IVPSDVDSDA DYWLLTDAAD VSITDMWRTE 420 PEVEWSNFGL HEDYAMVNVS TPRPESPVSN PTEVPSTANP TGS

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MSGSRAPNPS AQPSEQITHP LKPSQLPFSS MKPPFSVPGD YHRFGPDPRQ LTDHEADAII  60
VKPPLKRKGD TADYEAESSD RAAGPKIVEV VNSSLQTPVS IKAGKATKTL RLTKCSKARP  120
QTPVSTVGSP SGPNLTPAGP CRYDSSLGLL TKKFINLIKH AEDGILDLNK AADTLEVQKR  180
RIYDITNVLE GIGLIEKKLK NRIQWKGLDV SRPGDADENY ASLQAEVENL SIEEHRVDEQ  240
IREMQERLRD LSEDENNQKW LFVTEDDIKG LPCFQNETLI AIKAPHGTTL EVPDPDEAVD  300
YPQRRYRVVL RSTMGPIDVY LVSQFEEKFE EINGVQVPAN FPSSSGVNEN PATTIGTENR  360
GKDIEVQGQH DQGISVDPNA PQDSVGGIMK IVPSDVDSDA DYWLLTDAAD VSITDMWRTE  420
PEVEWSNFGL HEDYAMVNVS TPRPESPVSN PTEVPSTANP TGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	1e-155	E2F/DP family protein