PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON63038.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 546aa MW: 61554.2 Da PI: 6.4284

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON63038.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.8	1e-17	215	261	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd +l+++vkq+G + W+ Ia++m gR +kqc++rw+++l PON63038.1 215 KGQWTDEEDRKLIRLVKQYGVRKWAQIAEKMI-GRAGKQCRERWHNHL 261 799***************************.***********97 PP
2	Myb_DNA-binding	49	1.4e-15	267	309	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++W +eE+ +lv+a+++ G++ W+ Ia+++ gRt++ +k++w+ PON63038.1 267 KDSWNEEEERILVEAHAEVGNR-WAEIAKRIA-GRTENAIKNHWN 309 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 546 aa Download sequence
MEEGRGGGSS GFFSGDFTSY SRNAKPYNNT NNIYHHSYSS KPARPPFTAI DRFLSGQSHH 60 LTNTSSQLQV HDHQYNVASS NGLWDFSSNN FTNSHHDNIH HGAINYNSEV HFPWPSILST 120 SNHGDDDHHN LDDHHDLLQD QASFFEGLFV DDHDHDDDHM AGEAVMMNRT VLQERININN 180 TCPQGGVVEV VEMINSRKEM GKRALKKAPS AALIKGQWTD EEDRKLIRLV KQYGVRKWAQ 240 IAEKMIGRAG KQCRERWHNH LRPDIKKDSW NEEEERILVE AHAEVGNRWA EIAKRIAGRT 300 ENAIKNHWNA TKRRQNSRRK SSKQAESQKG KPQSSILQNY IRSKSLMMSN DNNNNNVPTV 360 VVDLSESNST NTTTDHSGSE SPLMVSDQIY DDELLFMQNL FSTSSSSSTS NNHIPPFVDN 420 CGTTTTTTTE SVQINGGDQQ KLNSTSDHID DDHRHGNSPI NSKNSSTTYI YSDLYLSYLL 480 NGAPPPTSSS SSSIIVDDHD YGQMSKMKTV EYADHDHQSY SNEAVVGNKR EMDLIEMVTS 540 SLFSKV

Sequence ? help Back to Top

Protein Sequence Length: 546 aa Download sequence

MEEGRGGGSS GFFSGDFTSY SRNAKPYNNT NNIYHHSYSS KPARPPFTAI DRFLSGQSHH  60
LTNTSSQLQV HDHQYNVASS NGLWDFSSNN FTNSHHDNIH HGAINYNSEV HFPWPSILST  120
SNHGDDDHHN LDDHHDLLQD QASFFEGLFV DDHDHDDDHM AGEAVMMNRT VLQERININN  180
TCPQGGVVEV VEMINSRKEM GKRALKKAPS AALIKGQWTD EEDRKLIRLV KQYGVRKWAQ  240
IAEKMIGRAG KQCRERWHNH LRPDIKKDSW NEEEERILVE AHAEVGNRWA EIAKRIAGRT  300
ENAIKNHWNA TKRRQNSRRK SSKQAESQKG KPQSSILQNY IRSKSLMMSN DNNNNNVPTV  360
VVDLSESNST NTTTDHSGSE SPLMVSDQIY DDELLFMQNL FSTSSSSSTS NNHIPPFVDN  420
CGTTTTTTTE SVQINGGDQQ KLNSTSDHID DDHRHGNSPI NSKNSSTTYI YSDLYLSYLL  480
NGAPPPTSSS SSSIIVDDHD YGQMSKMKTV EYADHDHQSY SNEAVVGNKR EMDLIEMVTS  540
SLFSKV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58850.1	4e-57	MYB family protein