PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON63226.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family YABBY
Protein Properties Length: 195aa    MW: 22022.9 Da    PI: 8.5895
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON63226.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY219.87.8e-6861673170
       YABBY   3 vfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssekl 101
                 v+ ++eq+Cy+ CnfCn +lavsvP +s+f +vtvrCGhCt+l svn+a a q l+ +++  ++  + +  + +  ++ ++s  +++ + +t+ ++   
  PON63226.1   6 VDVAPEQLCYIPCNFCNIVLAVSVPCSSMFDIVTVRCGHCTNLWSVNMAAAFQSLSWQQD--HHHVQAQNYNYNAPDHRIDSGSSSRCNINTKLAM--- 99 
                 67899*********************************************9999998876..3333333333333333344333333333333333... PP

       YABBY 102 senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                  +  + ++++   v+rPPekrqrvPsayn+fikeeiqrika+nPdishreafs+aaknWahfP+ihfgl
  PON63226.1 100 -RAPTTNITEERAVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGL 167
                 .3445555666679*****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MSSCSVDVAP EQLCYIPCNF CNIVLAVSVP CSSMFDIVTV RCGHCTNLWS VNMAAAFQSL  60
SWQQDHHHVQ AQNYNYNAPD HRIDSGSSSR CNINTKLAMR APTTNITEER AVNRPPEKRQ  120
RVPSAYNQFI KEEIQRIKAN NPDISHREAF STAAKNWAHF PHIHFGLMLK TNTQTKLDNG  180
SEKHLMPSRA ALLNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.12e-87YABBY family protein