PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON63391.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 267aa    MW: 30877.8 Da    PI: 8.9015
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON63391.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.82e-18132222199
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 f+k +++s+v+   +l lp +f+++h   ++e+ t+tl de+g ++  k+  +k++    l++GW++F  +++L +gD +vF+l++ +ef  +v ++r+
  PON63391.1 132 FVKPMLQSHVTGGFWLGLPVQFCKSHL--PHEDETITLVDENGDEFPTKYLADKTG----LSGGWRGFSIDHQLVDGDALVFHLVKPTEF--KVYIVRA 222
                 89************************5..335569***************666666....***********************9986666..8888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MVESKLTYEE CRKQRVEENK KRMEELNLSK LAQSLKTSSP KSTPVKQGKP RARLPVEPSS  60
VPLRRSNRVA DKPPPNYKEV PIEPLDRPRS YYRSYQRKDL LNRVYASDEV RQYAIYRAEM  120
LQSELESDSP SFVKPMLQSH VTGGFWLGLP VQFCKSHLPH EDETITLVDE NGDEFPTKYL  180
ADKTGLSGGW RGFSIDHQLV DGDALVFHLV KPTEFKVYIV RANESEDENE EEETKKNNRK  240
EKTKENNEDL DVAHITRSAK RLRASKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.12e-87B3 family protein