PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON63553.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 548aa    MW: 61544.9 Da    PI: 4.8018
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON63553.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS264.24.6e-81984053309
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                 +lL ecA+a+s++d +++++lL+ l+elasp+gd  q+la+yf++AL  + ++s+ ++y++l++ ++++++ + +      f+evsP+ +f+h++ N a
  PON63553.1  98 RLLKECAKAISDKDSTKIHHLLWILNELASPYGDCDQKLASYFLQALFCKATDSGLRCYRTLTSVADKTRSFDCARRLILKFQEVSPWTTFGHVASNGA 196
                 6899**********************************************************9999986554444444444****************** PP

        GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.....skeeleetgerLakfAeelgvpfefnvl.vakrledleleeL 194
                 Ilea++ge+++HiiD++ + ++QWp+Ll+aLa+R++++p+l++T+v+ ++++         ++e+ +r++kfA+ +gvpfef+v+   +rl +l+ e L
  PON63553.1 197 ILEALDGETKLHIIDISNTLCTQWPTLLEALATRNDETPRLKLTVVVTAATVvggggGGSVMKEITQRMEKFARLMGVPFEFKVVsELRRLGELTREGL 295
                 ************************************************99889999999*************************85555********** PP

        GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..nsesFlerflealeyysalfdsleaklpreseerikvErellg 291
                  v+ +Ea+aVn+v +l r       +e+ r++ +++++sl+P++v+vve+ead   ++e+F+  f e+l++y+  f++le+++p++s+e+ ++Ere  +
  PON63553.1 296 GVQDDEAVAVNCVGALRRAE-----VED-REAAMRAFRSLNPRIVTVVEEEADFtaTRENFVGCFEECLRFYTLYFEMLEESFPATSNEKLMLERE-CS 387
                 *****************997.....555.789*******************99866788*************************************.89 PP

        GRAS 292 reivnvvacegaerrerh 309
                 r iv v+ac   ++ +++
  PON63553.1 388 RGIVRVLACDDHDQDQDQ 405
                 *********998866554 PP
2GRAS25.11.9e-08429490293354
        GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveee 354
                 +i+n+  +   +  er+e+ ++W+erl++a F pv +s+++ +++k+ll++++ ++g   +++
  PON63553.1 429 KISNCCRTT-WDCSERREKGKQWSERLKRASFWPVGYSDDVLDDVKALLKRYPsGWGLIHQQQ 490
                 566654444.34599**************************************7777443333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 548 aa     Download sequence    
MDITLFTNIS SKQQTQYYFN SNTNTKHHDQ PIMIINANND QDQTAILLDT TMQSSNHNLP  60
PLPPLPLPLP TASTSLSPDS ALAAAATEQA AAGKWAPRLL KECAKAISDK DSTKIHHLLW  120
ILNELASPYG DCDQKLASYF LQALFCKATD SGLRCYRTLT SVADKTRSFD CARRLILKFQ  180
EVSPWTTFGH VASNGAILEA LDGETKLHII DISNTLCTQW PTLLEALATR NDETPRLKLT  240
VVVTAATVVG GGGGGSVMKE ITQRMEKFAR LMGVPFEFKV VSELRRLGEL TREGLGVQDD  300
EAVAVNCVGA LRRAEVEDRE AAMRAFRSLN PRIVTVVEEE ADFTATRENF VGCFEECLRF  360
YTLYFEMLEE SFPATSNEKL MLERECSRGI VRVLACDDHD QDQDQDHDHQ EMDQDPEGDR  420
NNSSSNNNKI SNCCRTTWDC SERREKGKQW SERLKRASFW PVGYSDDVLD DVKALLKRYP  480
SGWGLIHQQQ QQQQSQAIVG EDHRQQEQQE GQLLLHDDDD DSSSTSASAG IYLTWKEEPV  540
VWASAWKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.11e-117GRAS family protein