PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON63556.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

NF-YC

Protein Properties

Length: 138aa MW: 15907.9 Da PI: 4.3728

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON63556.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	90.8	1.3e-28	1	62	38	99
NF-YC 38 misaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 misa++P l+skacelfi+eltlrsw+++ee+krrtl+++dia a+ + + dflvd+vp + PON63556.1 1 MISADTPLLFSKACELFIMELTLRSWMQTEECKRRTLQRCDIARAIRNDELLDFLVDVVPLS 62 8**********************************************************965 PP

Sequence ? help Back to Top
Protein Sequence Length: 138 aa Download sequence
MISADTPLLF SKACELFIME LTLRSWMQTE ECKRRTLQRC DIARAIRNDE LLDFLVDVVP 60 LSHDHHYGQK EQESIGKNVL DANESSSTTA NEPQNLPTMN NFEENETVPM IQEAPQQFMF 120 DPSMSSAEFF YHFPSKVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63470.2	1e-25	NF-YC family protein