PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON63573.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

WRKY

Protein Properties

Length: 485aa MW: 53395 Da PI: 7.0835

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON63573.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	92.4	3.5e-29	113	170	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK vkg+e+ rsYYrCt+++C vkk++ers+ ++k+v+i+ g+H+h+k PON63573.1 113 EDGYNWRKYGQKLVKGNEYVRSYYRCTHPNCLVKKQLERSH-EGKIVDIIHFGQHDHPK 170 7**************************************.*************85 PP
2	WRKY	105.2	3.3e-33	290	348	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+vkg+++prsYYrC+ +gCpvkk+ver+++d+kvv+ tYeg+Hnh+ PON63573.1 290 VNDGYRWRKYGQKMVKGNPNPRSYYRCSNSGCPVKKHVERASHDTKVVIATYEGQHNHD 348 58********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MVPLGESVKD EVPSDKPQPT ERSNTENVVS QEISITGISS LQSDKQGSLK GIETKNIESV 60 PDSAVDALIL NQQRKASTTI HEKASKSPET GGLALQSGQE VSTPTIVREK VSEDGYNWRK 120 YGQKLVKGNE YVRSYYRCTH PNCLVKKQLE RSHEGKIVDI IHFGQHDHPK PQLSVPVAVG 180 FVVSIVEEKQ NESPYFTAAE GISVDEHRKP PTQTEHADTP QSPNIAANDR SKATLSHSSK 240 IKDEFYIDDD PDLKRQKKDK HHLETTTVDK PTTTSEPRLV VQTLSEVDIV NDGYRWRKYG 300 QKMVKGNPNP RSYYRCSNSG CPVKKHVERA SHDTKVVIAT YEGQHNHDVP PGRIVTHNVS 360 GSTLSPTAHH GDTAAKSDGN AASLVMVVDA ILEHESKPKE QPNGELRTRS APKNPANSDM 420 VIESRPSPDN RSDKQRNGKS GVKEEIDFPE NVPVETSKGN SPSLTSRTND KQNVDAEPSH 480 GNGGS

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MVPLGESVKD EVPSDKPQPT ERSNTENVVS QEISITGISS LQSDKQGSLK GIETKNIESV  60
PDSAVDALIL NQQRKASTTI HEKASKSPET GGLALQSGQE VSTPTIVREK VSEDGYNWRK  120
YGQKLVKGNE YVRSYYRCTH PNCLVKKQLE RSHEGKIVDI IHFGQHDHPK PQLSVPVAVG  180
FVVSIVEEKQ NESPYFTAAE GISVDEHRKP PTQTEHADTP QSPNIAANDR SKATLSHSSK  240
IKDEFYIDDD PDLKRQKKDK HHLETTTVDK PTTTSEPRLV VQTLSEVDIV NDGYRWRKYG  300
QKMVKGNPNP RSYYRCSNSG CPVKKHVERA SHDTKVVIAT YEGQHNHDVP PGRIVTHNVS  360
GSTLSPTAHH GDTAAKSDGN AASLVMVVDA ILEHESKPKE QPNGELRTRS APKNPANSDM  420
VIESRPSPDN RSDKQRNGKS GVKEEIDFPE NVPVETSKGN SPSLTSRTND KQNVDAEPSH  480
GNGGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G04880.2	1e-91	WRKY family protein