PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON64055.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MIKC_MADS

Protein Properties

Length: 217aa MW: 24850.5 Da PI: 9.4673

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON64055.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	94.7	4.3e-30	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye++s PON64055.1 9 KRIENAASRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFAS 59 79***********************************************86 PP
2	K-box	76.1	9.1e-26	91	180	9	98
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +e++++ ++++ + k+ie L+ ++R+llG++L+s+s+ eLqq+e+qLe+sl kiR++Kn+l++eqie+l++ e++l e+n +Lr++ PON64055.1 91 DHEHQSAMSKEDTFSMAKKIEHLEVSKRKLLGDGLDSCSIHELQQIENQLERSLGKIRARKNQLYKEQIEHLKEEERSLLEQNAKLREQC 180 56667778889999*************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence
MVRGKTQMKR IENAASRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFASS 60 RCISINKTIE RYTQRKAKDG GLSSAKAVSE DHEHQSAMSK EDTFSMAKKI EHLEVSKRKL 120 LGDGLDSCSI HELQQIENQL ERSLGKIRAR KNQLYKEQIE HLKEEERSLL EQNAKLREQC 180 GMVPLLPSTE QPEVVHNIGQ NMEVETELFI GLPERRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G22950.1	3e-80	MIKC_MADS family protein