PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON64084.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

GRF

Protein Properties

Length: 212aa MW: 23904.4 Da PI: 9.108

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON64084.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.7	1.2e-24	108	151	2	45
WRC 2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 +ep+rCrRtDGKkWRCs+++l+ +k+CErH+hrgr+rsrk +e+ PON64084.1 108 TEPWRCRRTDGKKWRCSKEALPHQKYCERHIHRGRHRSRKLVES 151 79**************************************9986 PP
2	QLQ	37.8	5.8e-14	38	71	3	36
QLQ 3 FTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 FT Ql++L Q+l+yKy+ a++PvP +L+++i+ PON64084.1 38 FTILQLHELQLQALIYKYIEAGLPVPYYLILPIW 71 7888*****************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
METNWSVQEE EGSSPIGLNL ELGRGSCHKL DNKRCCGFTI LQLHELQLQA LIYKYIEAGL 60 PVPYYLILPI WQSFSTSLGG LNNGLLSHFP NTLGVGAMCL DPKKGMETEP WRCRRTDGKK 120 WRCSKEALPH QKYCERHIHR GRHRSRKLVE SPKYGPNNGT SKTTTMVNPS NISGVSMGSN 180 MTDLSISLPD NKISSRSFLF PRLDFHPKEC SP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	1e-32	GRF family protein